RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 TSPAN1O60635 241 aa21.5■■□□□ 1.03
CD55-209ENST00000488171 GALTP07902 379 aa21.5■■□□□ 1.03
CD55-209ENST00000488171 XRCC6P12956 609 aaKnown RBP eCLIP21.5■■□□□ 1.03
CD55-209ENST00000488171 AFF1P51825 1210 aaKnown RBP21.5■■□□□ 1.03
CD55-209ENST00000488171 POU5F1BQ06416 359 aa21.5■■□□□ 1.03
CD55-209ENST00000488171 SMC1AQ14683 1233 aaKnown RBP21.5■■□□□ 1.03
CD55-209ENST00000488171 BCL7CQ8WUZ0 217 aaPredicted RBP21.5■■□□□ 1.03
CD55-209ENST00000488171 TMEM169Q96HH4 297 aa21.5■■□□□ 1.03
CD55-209ENST00000488171 DNAJB4Q9UDY4 337 aa21.5■■□□□ 1.03
CD55-209ENST00000488171 MED24O75448 989 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 ERLIN2O94905 339 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 GLRA2P23416 452 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 TFDP1Q14186 410 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 PCBP1Q15365 356 aaKnown RBP eCLIP21.49■■□□□ 1.03
CD55-209ENST00000488171 ZNF174Q15697 407 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 LLGL2Q6P1M3 1020 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 CATSPER3Q86XQ3 398 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 ZNF280BQ86YH2 543 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 SMG8Q8ND04 991 aaKnown RBP21.49■■□□□ 1.03
CD55-209ENST00000488171 SUSD6Q92537 303 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 IGSF21Q96ID5 467 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 RSAD1Q9HA92 442 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 TUFT1Q9NNX1 390 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 CNTNAP2Q9UHC6 1331 aa21.49■■□□□ 1.03
CD55-209ENST00000488171 OR52Z1P0C646 297 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 NCLP19338 710 aaKnown RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 TECP42680 631 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 SLC11A1P49279 550 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 RBM25P49756 843 aaKnown RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 RNASELQ05823 741 aaKnown RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 MBTD1Q05BQ5 628 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 ORC2Q13416 577 aaPredicted RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 AMHR2Q16671 573 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 ANKRD54Q6NXT1 300 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 VPS52Q8N1B4 723 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 CPB2Q96IY4 423 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 CCDC43Q96MW1 224 aaKnown RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 EIF2AQ9BY44 585 aaKnown RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 NFKBIZQ9BYH8 718 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 GBP3Q9H0R5 595 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 ZBP1Q9H171 429 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 S1PR5Q9H228 398 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 CARNS1A5YM72 827 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 LOC730098B7Z3J9 87 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 INO80B-WBP1J3KQ70 363 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 USO1O60763 962 aaKnown RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 DDHD2O94830 711 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 SRGAP2BP0DMP2 458 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 AXLP30530 894 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 SYCE2Q6PIF2 218 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 DDX53Q86TM3 631 aaKnown RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 RNF135Q8IUD6 432 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 NOSTRINQ8IVI9 506 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 FAM184AQ8NB25 1140 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 URGCPQ8TCY9 931 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 POLR3CQ9BUI4 534 aaPredicted RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 VN1R3Q9BXE9 311 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 POLR3FQ9H1D9 316 aaPredicted RBP21.48■■□□□ 1.03
CD55-209ENST00000488171 IPPQ9Y573 584 aa21.48■■□□□ 1.03
CD55-209ENST00000488171 PRR33A8MZF0 331 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 CLASP2O75122 1294 aaKnown RBP21.47■■□□□ 1.03
CD55-209ENST00000488171 CXCL14O95715 111 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 TTC38Q5R3I4 469 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 NOTUMQ6P988 496 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 CNNM3Q8NE01 707 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 AUTS2Q8WXX7 1259 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 CCDC51Q96ER9 411 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 PHF7Q9BWX1 381 aaPredicted RBP21.47■■□□□ 1.03
CD55-209ENST00000488171 GPRC5CQ9NQ84 441 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 MUTYHQ9UIF7 546 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 DBR1Q9UK59 544 aaKnown RBP21.47■■□□□ 1.03
CD55-209ENST00000488171 HCFC2Q9Y5Z7 792 aa21.47■■□□□ 1.03
CD55-209ENST00000488171 CTSAP10619 480 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 ARF4P18085 180 aaPredicted RBP21.46■■□□□ 1.03
CD55-209ENST00000488171 RPA1P27694 616 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 TRAPPC10P48553 1259 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 NBR1Q14596 966 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 CBX2Q14781 532 aaPredicted RBP21.46■■□□□ 1.03
CD55-209ENST00000488171 HERC4Q5GLZ8 1057 aaPredicted RBP21.46■■□□□ 1.03
CD55-209ENST00000488171 POTEGQ6S5H5 508 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 MAEAQ7L5Y9 396 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 C4orf32Q8N8J7 132 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 CASP10Q92851 521 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 NACC1Q96RE7 527 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 APOL5Q9BWW9 433 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 CSRNP2Q9H175 543 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 RNF39Q9H2S5 420 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 KANSL3Q9P2N6 904 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 IRAK3Q9Y616 596 aa21.46■■□□□ 1.03
CD55-209ENST00000488171 INPPL1O15357 1258 aa21.45■■□□□ 1.02
CD55-209ENST00000488171 B4GALT5O43286 388 aa21.45■■□□□ 1.02
CD55-209ENST00000488171 POMCP01189 267 aa21.45■■□□□ 1.02
CD55-209ENST00000488171 ITGA4P13612 1032 aa21.45■■□□□ 1.02
CD55-209ENST00000488171 HOXB8P17481 243 aaPredicted RBP21.45■■□□□ 1.02
CD55-209ENST00000488171 U2AF2P26368 475 aaKnown RBP eCLIP21.45■■□□□ 1.023e-6■■■■■ 26.9
CD55-209ENST00000488171 NCBP1Q09161 790 aaKnown RBP21.45■■□□□ 1.02
CD55-209ENST00000488171 TMEM175Q9BSA9 504 aa21.45■■□□□ 1.02
CD55-209ENST00000488171 UBN1Q9NPG3 1134 aa21.45■■□□□ 1.02
CD55-209ENST00000488171 HES2Q9Y543 173 aa21.45■■□□□ 1.02
CD55-209ENST00000488171 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms