RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 CXCL16Q9H2A7 254 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 CERS4Q9HA82 394 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 ARHGAP28Q9P2N2 729 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 COL4A6Q14031 1691 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 TLL1O43897 1013 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 TBCAO75347 108 aaKnown RBP18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 ERLIN2O94905 339 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 CA3P07451 260 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 MAPTP10636 758 aaKnown RBP18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 ZSCAN20P17040 1043 aaPredicted RBP18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 AFF1P51825 1210 aaKnown RBP18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 CASP5P51878 434 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 PPP2R5AQ15172 486 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 SLC24A5Q71RS6 500 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 ECHDC2Q86YB7 292 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 ZNF710Q8N1W2 664 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 PHOSPHO2Q8TCD6 241 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 SPIRE2Q8WWL2 714 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 ERCC4Q92889 916 aaPredicted RBP18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 FAM161BQ96MY7 647 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 ZBED2Q9BTP6 218 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 TARS2Q9BW92 718 aaKnown RBP18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 TTYH1Q9H313 450 aaPredicted RBP18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 PARVGQ9HBI0 331 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 KCND2Q9NZV8 630 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 ODF2LQ9ULJ1 636 aa18.9■□□□□ 0.62
SHROOM1-205ENST00000488072 TISP43B9A030 160 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 TRAK2O60296 914 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 EFCAB14O75071 495 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 PRPF40AO75400 957 aaKnown RBP18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 ZNF202O95125 648 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 NPTXRO95502 500 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 SLFN14P0C7P3 912 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 DNAJB2P25686 324 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 NCKAP1LP55160 1127 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 ASIC1P78348 528 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 SMAD3P84022 425 aaKnown RBP18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 KCNA1Q09470 495 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 SNW1Q13573 536 aaKnown RBP18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 PPP4R3CPQ6ZMV5 832 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 HAUS6Q7Z4H7 955 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 ZNF598Q86UK7 904 aaKnown RBP18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 FMR1NBQ8N0W7 255 aaPredicted RBP18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 SMG8Q8ND04 991 aaKnown RBP18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 ENGASEQ8NFI3 743 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 C7orf25Q9BPX7 421 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 NTPCRQ9BSD7 190 aaKnown RBP18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 TIPINQ9BVW5 301 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 APOL6Q9BWW8 343 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 TNMDQ9H2S6 317 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 PDZD7Q9H5P4 517 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 PANK4Q9NVE7 773 aa18.89■□□□□ 0.61
SHROOM1-205ENST00000488072 K7ENM7 598 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 K7ERI5 159 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 ACKR2O00590 384 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 MYBP10242 640 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 HTRA4P83105 476 aaPredicted RBP18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 COASYQ13057 564 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 PRPF4BQ13523 1007 aaKnown RBP18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 MAPK6Q16659 721 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 FAM187BQ17R55 369 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 CLLU1OSQ5K130 101 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 KRBA2Q6ZNG9 492 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 TIFAQ96CG3 184 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 HAPLN2Q9GZV7 340 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 C2orf40Q9H1Z8 148 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 RC3H2Q9HBD1 1191 aaKnown RBP18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 FAM105AQ9NUU6 356 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 PRMT7Q9NVM4 692 aaPredicted RBP18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 PCDHB2Q9Y5E7 798 aa18.88■□□□□ 0.61
SHROOM1-205ENST00000488072 A0A0U1RQF3 1178 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 FRMD3A2A2Y4 597 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 EPOPA6NHQ4 379 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 RFXAPO00287 272 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 KLRC4O43908 158 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 NR1I2O75469 434 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 DGKIO75912 1065 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 HERC4Q5GLZ8 1057 aaPredicted RBP18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 ZBTB33Q86T24 672 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 NPAS4Q8IUM7 802 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 CEP57L1Q8IYX8 460 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 CEP120Q8N960 986 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 TMEM87AQ8NBN3 555 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 ACO2Q99798 780 aaKnown RBP18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 CUEDC2Q9H467 287 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 NXF3Q9H4D5 531 aaKnown RBP18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 CHST12Q9NRB3 414 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 C1orf112Q9NSG2 853 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 CNTNAP2Q9UHC6 1331 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 MTUS1Q9ULD2 1270 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 LRFN2Q9ULH4 789 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 PCDHB7Q9Y5E2 793 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 PCDHA11Q9Y5I1 949 aa18.87■□□□□ 0.61
SHROOM1-205ENST00000488072 A0A1B0GUA9 196 aa18.86■□□□□ 0.61
SHROOM1-205ENST00000488072 GOLGA6L4A6NEF3 574 aa18.86■□□□□ 0.61
SHROOM1-205ENST00000488072 HARSP12081 509 aaKnown RBP18.86■□□□□ 0.61
SHROOM1-205ENST00000488072 AKAP5P24588 427 aa18.86■□□□□ 0.61
SHROOM1-205ENST00000488072 TAP1Q03518 808 aa18.86■□□□□ 0.61
SHROOM1-205ENST00000488072 TMEM132AQ24JP5 1023 aa18.86■□□□□ 0.61
SHROOM1-205ENST00000488072 SEZ6Q53EL9 994 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms