RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 STMN4Q9H169 189 aaPredicted RBP10.79□□□□□ -0.68
TMF1-203ENST00000488010 PCIF1Q9H4Z3 704 aa10.79□□□□□ -0.68
TMF1-203ENST00000488010 HOMER3Q9NSC5 361 aa10.79□□□□□ -0.68
TMF1-203ENST00000488010 MYO3BQ8WXR4 1341 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 SYNGAP1Q96PV0 1343 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 EML1O00423 815 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 PYGMP11217 842 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 NCALDP61601 193 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 UBXN2AP68543 259 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 SPIRE1Q08AE8 756 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 CRYMQ14894 314 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 TBC1D10BQ4KMP7 808 aaPredicted RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 TLDC1Q6P9B6 456 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 EXOC3L1Q86VI1 746 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 COL23A1Q86Y22 540 aaPredicted RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 CNBD1Q8NA66 436 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 AGPAT1Q99943 283 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 EIF2AK1Q9BQI3 630 aaKnown RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 TRIM6Q9C030 488 aaPredicted RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 ACP6Q9NPH0 428 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 APEX2Q9UBZ4 518 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 DIS3Q9Y2L1 958 aaKnown RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 USP15Q9Y4E8 981 aaPredicted RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 AFF2P51816 1311 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 SNX3O60493 162 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 GSTA1P08263 222 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 DLATP10515 647 aaKnown RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 MMP14P50281 582 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 TCP10Q12799 353 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 RPUSD2Q8IZ73 545 aaKnown RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 ETNPPLQ8TBG4 499 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 C1orf54Q8WWF1 131 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
TMF1-203ENST00000488010 ASIC3Q9UHC3 531 aa10.78□□□□□ -0.68
TMF1-203ENST00000488010 SUN1O94901 812 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 RARAP10276 462 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 PEX19P40855 299 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 CACNB3P54284 484 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 FAM182BQ5T319 152 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 PHLDB3Q6NSJ2 640 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 RINT1Q6NUQ1 792 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 OLIG1Q8TAK6 271 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 ZSWIM1Q9BR11 485 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 PARP2Q9UGN5 583 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 C15orf41Q9Y2V0 281 aa10.77□□□□□ -0.68
TMF1-203ENST00000488010 THRAP3Q9Y2W1 955 aaKnown RBP10.77□□□□□ -0.68
TMF1-203ENST00000488010 CFAP73A6NFT4 308 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 UBAP1LF5GYI3 381 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 PODXLO00592 558 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 MEIS2O14770 477 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 MSH4O15457 936 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 GH1P01241 217 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 KRT16P08779 473 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 SLFN13Q68D06 897 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 FAM178BQ8IXR5 827 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 MICAL1Q8TDZ2 1067 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 GPR88Q9GZN0 384 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 CDC42EP4Q9H3Q1 356 aaKnown RBP10.77□□□□□ -0.69
TMF1-203ENST00000488010 MTUS1Q9ULD2 1270 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.69
TMF1-203ENST00000488010 PFASO15067 1338 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 PASKQ96RG2 1323 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 SHMT1P34896 483 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 NOVP48745 357 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 SLMAPQ14BN4 828 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 SPDYCQ5MJ68 293 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 ODR4Q5SWX8 454 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 FAM47EQ6ZV65 393 aa10.77□□□□□ -0.69
TMF1-203ENST00000488010 NOP53Q9NZM5 478 aaKnown RBP10.77□□□□□ -0.69
TMF1-203ENST00000488010 GTPBP10A4D1E9 387 aaKnown RBP10.76□□□□□ -0.69
TMF1-203ENST00000488010 STX2P32856 288 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 GABPAQ06546 454 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 FAM98CQ17RN3 349 aaKnown RBP10.76□□□□□ -0.69
TMF1-203ENST00000488010 PHLDB2Q86SQ0 1253 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 RHOT2Q8IXI1 618 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 KAT5Q92993 513 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 DYDC2Q96IM9 177 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 PWWP2AQ96N64 755 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 FAM167BQ9BTA0 163 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 ZMYM2Q9UBW7 1377 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 IGKV6D-41A0A0C4DH26 115 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 TISP43B9A030 160 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 CLDN3O15551 220 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 RPS6KA4O75676 772 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 ECEL1O95672 775 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 EYA4O95677 639 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 RARGP13631 454 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 EEF2P13639 858 aaKnown RBP10.76□□□□□ -0.69
TMF1-203ENST00000488010 COILP38432 576 aaPredicted RBP10.76□□□□□ -0.69
TMF1-203ENST00000488010 GCLMP48507 274 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 DLG4P78352 724 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 ERICH1Q86X53 443 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 ARHGEF19Q8IW93 802 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 ELMO3Q96BJ8 720 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 SPDL1Q96EA4 605 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 PARVGQ9HBI0 331 aa10.76□□□□□ -0.69
TMF1-203ENST00000488010 CNOT7Q9UIV1 285 aaKnown RBP10.76□□□□□ -0.69
TMF1-203ENST00000488010 MIF4GDA9UHW6 222 aaKnown RBP10.76□□□□□ -0.69
TMF1-203ENST00000488010 HLA-DOAP06340 250 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms