RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 USTQ9Y2C2 406 aa18.13■□□□□ 0.49
SRRT-212ENST00000487311 PLXNA3P51805 1871 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 NRP1O14786 923 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 POMCP01189 267 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 ALDH2P05091 517 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 RAB27AP51159 221 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 CLCN4P51793 760 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 GPR149Q86SP6 731 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 PGBD4Q96DM1 585 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 SLKQ9H2G2 1235 aaPredicted RBP18.12■□□□□ 0.49
SRRT-212ENST00000487311 RNF39Q9H2S5 420 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 FAN1Q9Y2M0 1017 aa18.12■□□□□ 0.49
SRRT-212ENST00000487311 CACNA1HO95180 2353 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 CPLX1O14810 134 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 P4HBP07237 508 aaKnown RBP18.11■□□□□ 0.49
SRRT-212ENST00000487311 KLRC2P26717 231 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 NUBP1P53384 320 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 LAMTOR4Q0VGL1 99 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 EARS2Q5JPH6 523 aaKnown RBP18.11■□□□□ 0.49
SRRT-212ENST00000487311 ASTLQ6HA08 431 aaPredicted RBP18.11■□□□□ 0.49
SRRT-212ENST00000487311 GALNT17Q6IS24 598 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 ASCL5Q7RTU5 278 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 PLCD3Q8N3E9 789 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 SMG8Q8ND04 991 aaKnown RBP18.11■□□□□ 0.49
SRRT-212ENST00000487311 OXER1Q8TDS5 423 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 RSPH1Q8WYR4 309 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
SRRT-212ENST00000487311 PHF20Q9BVI0 1012 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 IRF2BPLQ9H1B7 796 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 RSAD1Q9HA92 442 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 MIOSQ9NXC5 875 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 CYP46A1Q9Y6A2 500 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 VPS13AQ96RL7 3174 aa18.11■□□□□ 0.49
SRRT-212ENST00000487311 PROB1E7EW31 1015 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 PI15O43692 258 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 REC8O95072 547 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 MYBP10242 640 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 KRT25Q7Z3Z0 450 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 SRGAP1Q7Z6B7 1085 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 PPFIBP1Q86W92 1011 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 URGCPQ8TCY9 931 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 PSPC1Q8WXF1 523 aaKnown RBP18.1■□□□□ 0.49
SRRT-212ENST00000487311 SLC7A3Q8WY07 619 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 FAM20AQ96MK3 541 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 EIF2AQ9BY44 585 aaKnown RBP18.1■□□□□ 0.49
SRRT-212ENST00000487311 MARCH5Q9NX47 278 aa18.1■□□□□ 0.49
SRRT-212ENST00000487311 ZFHX2Q9C0A1 2572 aaPredicted RBP18.09■□□□□ 0.49
SRRT-212ENST00000487311 F8W810 466 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 C2CD2LO14523 706 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 N4BP1O75113 896 aaKnown RBP18.09■□□□□ 0.49
SRRT-212ENST00000487311 NPR3P17342 541 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 NCLP19338 710 aaKnown RBP18.09■□□□□ 0.49
SRRT-212ENST00000487311 SCRN1Q12765 414 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 CTTNQ14247 550 aaKnown RBP18.09■□□□□ 0.49
SRRT-212ENST00000487311 EPHA7Q15375 998 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 PPP4R3AQ6IN85 833 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 FERMT3Q86UX7 667 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 C4orf19Q8IY42 314 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 RNF149Q8NC42 400 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 DYDC2Q96IM9 177 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 FAM193BQ96PV7 902 aaPredicted RBP18.09■□□□□ 0.49
SRRT-212ENST00000487311 TMEM175Q9BSA9 504 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 SFXN1Q9H9B4 322 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 KANSL3Q9P2N6 904 aa18.09■□□□□ 0.49
SRRT-212ENST00000487311 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.49
SRRT-212ENST00000487311 CARNS1A5YM72 827 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 CCNT1O60563 726 aaKnown RBP18.08■□□□□ 0.48
SRRT-212ENST00000487311 EFEMP2O95967 443 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 YWHABP31946 246 aaKnown RBP18.08■□□□□ 0.48
SRRT-212ENST00000487311 CLCN5P51795 746 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 SPIRE1Q08AE8 756 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 CWF19L1Q69YN2 538 aaKnown RBP18.08■□□□□ 0.48
SRRT-212ENST00000487311 PIK3AP1Q6ZUJ8 805 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 NEK8Q86SG6 692 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 COLGALT2Q8IYK4 626 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 CPB2Q96IY4 423 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 LXNQ9BS40 222 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 EMILIN2Q9BXX0 1053 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 KCNK12Q9HB15 430 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 XPNPEP1Q9NQW7 623 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 MRPL17Q9NRX2 175 aaKnown RBP18.08■□□□□ 0.48
SRRT-212ENST00000487311 PRG3Q9Y2Y8 225 aaPredicted RBP18.08■□□□□ 0.48
SRRT-212ENST00000487311 HES2Q9Y543 173 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 IPPQ9Y573 584 aa18.08■□□□□ 0.48
SRRT-212ENST00000487311 DENND4AQ7Z401 1863 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 CCDC194A0A1B0GVG4 234 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 FAM205CA6NFA0 338 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 SLITRK3O94933 977 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 SOD2P04179 222 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 RFC5P40937 340 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 CYP4A11Q02928 519 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 TDGQ13569 410 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 EMC2Q15006 297 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 XKR9Q5GH70 373 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 KIAA0319Q5VV43 1072 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 POTEDQ86YR6 584 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 RNF168Q8IYW5 571 aaPredicted RBP18.07■□□□□ 0.48
SRRT-212ENST00000487311 FAM177A1Q8N128 213 aaPredicted RBP18.07■□□□□ 0.48
SRRT-212ENST00000487311 FLCNQ8NFG4 579 aa18.07■□□□□ 0.48
SRRT-212ENST00000487311 RSAD2Q8WXG1 361 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms