RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 NPEPPSP55786 919 aa21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 LETM2Q2VYF4 491 aa21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 UBXN11Q5T124 520 aa21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 C15orf39Q6ZRI6 1047 aa21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 TRIM22Q8IYM9 498 aa21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 BLIDQ8IZY5 108 aa21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 NKD2Q969F2 451 aaPredicted RBP21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 KCNK12Q9HB15 430 aa21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 MRPL17Q9NRX2 175 aaKnown RBP21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 DDX25Q9UHL0 483 aaKnown RBP21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 FAN1Q9Y2M0 1017 aa21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 CNTNAP2Q9UHC6 1331 aa21.78■■□□□ 1.08
SMPDL3A-202ENST00000487215 NRP1O14786 923 aa21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 POMCP01189 267 aa21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 ALDH2P05091 517 aa21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 NPY5RQ15761 445 aa21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 CENPQQ7L2Z9 268 aaPredicted RBP21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 ZNF579Q8NAF0 562 aaKnown RBP21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 DAGLBQ8NCG7 672 aa21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 SLC7A3Q8WY07 619 aa21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 FAM193BQ96PV7 902 aaPredicted RBP21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 MINDY3Q9H8M7 445 aa21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 KANSL3Q9P2N6 904 aa21.77■■□□□ 1.08
SMPDL3A-202ENST00000487215 C2CD2LO14523 706 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 SLC37A4O43826 429 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 SOD2P04179 222 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 HOXA11P31270 313 aaPredicted RBP21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 QARSP47897 775 aaKnown RBP21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 FOXK2Q01167 660 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 SSRP1Q08945 709 aaKnown RBP21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 SRGAP1Q7Z6B7 1085 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 CCDC105Q8IYK2 499 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 CMASQ8NFW8 434 aaPredicted RBP21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 PRPF31Q8WWY3 499 aaKnown RBP21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 TMEM143Q96AN5 459 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 HERC2P3Q9BVR0 1158 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 DHX33Q9H6R0 707 aaKnown RBP21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 MAN1C1Q9NR34 630 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 MARCH5Q9NX47 278 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 WRAP73Q9P2S5 460 aaPredicted RBP21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 FBXL21Q9UKT6 434 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 VAV3Q9UKW4 847 aa21.76■■□□□ 1.07
SMPDL3A-202ENST00000487215 N4BP1O75113 896 aaKnown RBP21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 URODP06132 367 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 SRGAP2CP0DJJ0 459 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 PSMA5P28066 241 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 PPP2R5CQ13362 524 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 NONOQ15233 471 aaKnown RBP eCLIP21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 INF2Q27J81 1249 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 SIX5Q8N196 739 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 PSPC1Q8WXF1 523 aaKnown RBP21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 CEP170P1Q96L14 293 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 RPS6KC1Q96S38 1066 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 BMP2KQ9NSY1 1161 aaPredicted RBP21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 IGSF9Q9P2J2 1179 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 PRG3Q9Y2Y8 225 aaPredicted RBP21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 C2orf16Q68DN1 1984 aa21.75■■□□□ 1.07
SMPDL3A-202ENST00000487215 NARSO43776 548 aaKnown RBP21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 DEXIO95424 95 aa21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 NCLP19338 710 aaKnown RBP21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 AK2P54819 239 aa21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 LAMTOR4Q0VGL1 99 aa21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 TOB2Q14106 344 aaPredicted RBP21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 TAS1R1Q7RTX1 841 aa21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 ADSSL1Q8N142 457 aa21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 AIFM3Q96NN9 605 aa21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 RTP3Q9BQQ7 232 aa21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 PPME1Q9Y570 386 aa21.74■■□□□ 1.07
SMPDL3A-202ENST00000487215 TEX28O15482 410 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 DKC1O60832 514 aaKnown RBP eCLIP21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 ADH1AP07327 375 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 RFC5P40937 340 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 ANGPT1Q15389 498 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 GALNT17Q6IS24 598 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 KRT25Q7Z3Z0 450 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 COLGALT2Q8IYK4 626 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 RNF168Q8IYW5 571 aaPredicted RBP21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 DTWD2Q8NBA8 298 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 SMG8Q8ND04 991 aaKnown RBP21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 KCNMB3Q9NPA1 279 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 SSX2IPQ9Y2D8 614 aa21.73■■□□□ 1.07
SMPDL3A-202ENST00000487215 VPS13AQ96RL7 3174 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 CCDC195A0A1B0GUA6 201 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 EFEMP2O95967 443 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 P4HBP07237 508 aaKnown RBP21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 ITGA4P13612 1032 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 OR1G1P47890 313 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 EXOC8Q8IYI6 725 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 FAM177A1Q8N128 213 aaPredicted RBP21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 RNF149Q8NC42 400 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 CNNM3Q8NE01 707 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 RSAD2Q8WXG1 361 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 FAM20AQ96MK3 541 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 RHOBTB2Q9BYZ6 727 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 SLKQ9H2G2 1235 aaPredicted RBP21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 WDR6Q9NNW5 1121 aaKnown RBP21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 UBN1Q9NPG3 1134 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 IPPQ9Y573 584 aa21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 PTPRZ1P23471 2315 aaPredicted RBP21.72■■□□□ 1.07
SMPDL3A-202ENST00000487215 CPLX1O14810 134 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms