RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 PAK6Q9NQU5 681 aaPredicted RBP7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 GPRC5DQ9NZD1 345 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 GULP1Q9UBP9 304 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 CNOT7Q9UIV1 285 aaKnown RBP7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 MAPRE3Q9UPY8 281 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 FPGT-TNNI3KV9GXZ4 949 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 DICER1Q9UPY3 1922 aaKnown RBP7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 A0A1W2PQ45 241 aaPredicted RBP7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 A0A1W2PQY0 241 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 B4E1Z4 1266 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 ARVCFO00192 962 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 KPNA6O60684 536 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 RAB11FIP3O75154 756 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 HMGB1P09429 215 aaKnown RBP7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 FUT4P22083 530 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 GTF2A2P52657 109 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 RTP1P59025 263 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 PAK1Q13153 545 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 LSAMPQ13449 338 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 PLCL1Q15111 1095 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 HSP90AB4PQ58FF6 505 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 SLC23A3Q6PIS1 610 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 NFXL1Q6ZNB6 911 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 RNF180Q86T96 592 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 TP53INP2Q8IXH6 220 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 AHI1Q8N157 1196 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 ANKS4BQ8N8V4 417 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 AGBL3Q8NEM8 1001 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 LEO1Q8WVC0 666 aaPredicted RBP7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 DPF3Q92784 378 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 DPF2Q92785 391 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 PCMTD2Q9NV79 361 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 PPARGC1AQ9UBK2 798 aaKnown RBP7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 HACL1Q9UJ83 578 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 FBXL7Q9UJT9 491 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 FAM205AQ6ZU69 1335 aa7.49□□□□□ -1.21
RTFDC1-209ENST00000487211 SCN9AQ15858 1988 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 A0A1W2PQ27 194 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 A0A1W2PQ64 194 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 A0A1W2PQC6 194 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 A0A1W2PQD8 194 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 SOD2P04179 222 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 GRK2P25098 689 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 RPS12P25398 132 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 EPHX2P34913 555 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 GRK3P35626 688 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 CHAF1AQ13111 956 aaPredicted RBP7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 HDAC1Q13547 482 aaPredicted RBP7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 PCBP1Q15365 356 aaKnown RBP eCLIP7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 CFAP100Q494V2 611 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 HSF5Q4G112 596 aaPredicted RBP7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 CDCA2Q69YH5 1023 aaPredicted RBP7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 ZCCHC8Q6NZY4 707 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 CEP68Q76N32 757 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 DDX53Q86TM3 631 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 ERC1Q8IUD2 1116 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 PCDH19Q8TAB3 1148 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 KIF1BPQ96EK5 621 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 CCDC120Q96HB5 630 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 IPPKQ9H8X2 491 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 CLDND1Q9NY35 253 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 MARCH2Q9P0N8 246 aa7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 DBNLQ9UJU6 430 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-209ENST00000487211 H7C1D1 291 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 FRAT2O75474 233 aaPredicted RBP7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 WNT11O96014 354 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 POU3F2P20265 443 aaPredicted RBP7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 ZNF280AP59817 542 aaPredicted RBP7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 FKBP1AP62942 108 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 CHRNEQ04844 493 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 TBC1D10BQ4KMP7 808 aaPredicted RBP7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 MFSD14BQ5SR56 506 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 PIK3R6Q5UE93 754 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 ABHD17CQ6PCB6 329 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 AACSQ86V21 672 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 SPPL2CQ8IUH8 684 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 CLASRPQ8N2M8 674 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 OXR1Q8N573 874 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 PDZD8Q8NEN9 1154 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 TMEM169Q96HH4 297 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 LRRCC1Q9C099 1032 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 ADARB2Q9NS39 739 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 HMG20BQ9P0W2 317 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 SAMD15Q9P1V8 674 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 IMPACTQ9P2X3 320 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 COQ6Q9Y2Z9 468 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 RWDD3Q9Y3V2 267 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 PCDHAC2Q9Y5I4 1007 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 TAF6LQ9Y6J9 622 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 PASKQ96RG2 1323 aa7.47□□□□□ -1.21
RTFDC1-209ENST00000487211 FAM47E-STBD1D6RA91 191 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 F8W031 263 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 PPP1R11O60927 126 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 FUCA1P04066 466 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 FPR2P25090 351 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 MCAMP43121 646 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 DNM2P50570 870 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 NFKB2Q00653 900 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 CCDC158Q5M9N0 1113 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 GORABQ5T7V8 394 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms