RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 MSRAQ9UJ68 235 aa6.36□□□□□ -1.39
COPS3-209ENST00000486810 UQCRHLA0A096LP55 91 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 SH3BP5O60239 455 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 UQCRHP07919 91 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 FAM163BP0C2L3 166 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 VDRP11473 427 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 SOX5P35711 763 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 OCRLQ01968 901 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 PLP2Q04941 152 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 NFYCQ13952 458 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 ATP13A4Q4VNC1 1196 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 SASS6Q6UVJ0 657 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 ZSCAN30Q86W11 494 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 SAMD3Q8N6K7 520 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 FAM184AQ8NB25 1140 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 SLC5A5Q92911 643 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 USP7Q93009 1102 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 ZBTB9Q96C00 473 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 CFAP53Q96M91 514 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 NOL10Q9BSC4 688 aaKnown RBP6.35□□□□□ -1.39
COPS3-209ENST00000486810 POLR3CQ9BUI4 534 aaPredicted RBP6.35□□□□□ -1.39
COPS3-209ENST00000486810 TMX4Q9H1E5 349 aaPredicted RBP6.35□□□□□ -1.39
COPS3-209ENST00000486810 IFT22Q9H7X7 185 aa6.35□□□□□ -1.39
COPS3-209ENST00000486810 ZNF536O15090 1300 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 A0A0A6YYJ9 748 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 A0A0A6YYK5 440 aaPredicted RBP6.34□□□□□ -1.39
COPS3-209ENST00000486810 PES1O00541 588 aaKnown RBP6.34□□□□□ -1.39
COPS3-209ENST00000486810 APOL3O95236 402 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 CELA3BP08861 270 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 PAX3P23760 479 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 LSP1P33241 339 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 MCM5P33992 734 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 HGFACQ04756 655 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 ADAM15Q13444 863 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 DDB1Q16531 1140 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 SLFN13Q68D06 897 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 USP30Q70CQ3 517 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 AMOTL1Q8IY63 956 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 CLRN3Q8NCR9 226 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 PNISRQ8TF01 805 aaKnown RBP6.34□□□□□ -1.39
COPS3-209ENST00000486810 NEIL1Q96FI4 390 aaPredicted RBP6.34□□□□□ -1.39
COPS3-209ENST00000486810 GPATCH3Q96I76 525 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 GNRHR2Q96P88 292 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 SLX1AQ9BQ83 275 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 LZTS2Q9BRK4 669 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 SOX7Q9BT81 388 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 MTG2Q9H4K7 406 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 PRDM12Q9H4Q4 367 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 SEC61A2Q9H9S3 476 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 KCMF1Q9P0J7 381 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 PNMA2Q9UL42 364 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 TMPRSS11EQ9UL52 423 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 DENND2AQ9ULE3 1009 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 PRKAB1Q9Y478 270 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 CTDP1Q9Y5B0 961 aaPredicted RBP6.34□□□□□ -1.39
COPS3-209ENST00000486810 COMMD10Q9Y6G5 202 aa6.34□□□□□ -1.39
COPS3-209ENST00000486810 PRDM2Q13029 1718 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 PRSS38A1L453 326 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 C2orf78A6NCI8 922 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 IPO5O00410 1097 aaKnown RBP6.33□□□□□ -1.4
COPS3-209ENST00000486810 ARHGAP6O43182 974 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 ZEB2O60315 1214 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 OPHN1O60890 802 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 SKILP12757 684 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 EIF5P55010 431 aaKnown RBP6.33□□□□□ -1.4
COPS3-209ENST00000486810 NAP1L1P55209 391 aaKnown RBP6.33□□□□□ -1.4
COPS3-209ENST00000486810 BCAR1P56945 870 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 IRX1P78414 480 aaPredicted RBP6.33□□□□□ -1.4
COPS3-209ENST00000486810 TRAF1Q13077 416 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 DUSP8Q13202 625 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 ACAP1Q15027 740 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 PDCD1Q15116 288 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 DGKDQ16760 1214 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 ZMAT1Q5H9K5 638 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 BMP8AQ7Z5Y6 402 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 CXorf67Q86X51 503 aaPredicted RBP6.33□□□□□ -1.4
COPS3-209ENST00000486810 LYSMD2Q8IV50 215 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 RTKN2Q8IZC4 609 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 ZNF396Q96N95 335 aaPredicted RBP6.33□□□□□ -1.4
COPS3-209ENST00000486810 TTC1Q99614 292 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 OR10A2Q9H208 303 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 VTA1Q9NP79 307 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 UTP6Q9NYH9 597 aaKnown RBP6.33□□□□□ -1.4
COPS3-209ENST00000486810 OGFRQ9NZT2 677 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 USP36Q9P275 1121 aaKnown RBP6.33□□□□□ -1.4
COPS3-209ENST00000486810 SAE1Q9UBE0 346 aaPredicted RBP6.33□□□□□ -1.4
COPS3-209ENST00000486810 PPP2R3BQ9Y5P8 575 aa6.33□□□□□ -1.4
COPS3-209ENST00000486810 NCANO14594 1321 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 BICDL2A1A5D9 508 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 NPEPPSL1A6NEC2 478 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 GOLGA6L6A8MZA4 724 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 B8ZZF3 427 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 FRAT2O75474 233 aaPredicted RBP6.32□□□□□ -1.4
COPS3-209ENST00000486810 PFKMP08237 780 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 MANFP55145 182 aaKnown RBP6.32□□□□□ -1.4
COPS3-209ENST00000486810 ADAM8P78325 824 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 CBX1P83916 185 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 EFEMP1Q12805 493 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms