RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 G3BP2Q9UN86 482 aaKnown RBP6.15□□□□□ -1.42
SMC4-218ENST00000486711 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.14□□□□□ -1.43
SMC4-218ENST00000486711 DVL2O14641 736 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 MARCH6O60337 910 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 MAN2A2P49641 1150 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 SESN3P58005 492 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 ANTXR2P58335 489 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 ADAM8P78325 824 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 MTMR1Q13613 665 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 ACAP1Q15027 740 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 DDB1Q16531 1140 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 PRAMEF9Q5VWM5 478 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 FAM111BQ6SJ93 734 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 BMP8AQ7Z5Y6 402 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 LDLRAD3Q86YD5 345 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 CNTD1Q8N815 330 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 KIAA1958Q8N8K9 716 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 RPGRQ92834 1020 aaKnown RBP6.14□□□□□ -1.43
SMC4-218ENST00000486711 CLIP3Q96DZ5 547 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 DYDC2Q96IM9 177 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 WDR92Q96MX6 357 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 SMAD5Q99717 465 aaKnown RBP6.14□□□□□ -1.43
SMC4-218ENST00000486711 TCF25Q9BQ70 676 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 TCEAL9Q9UHQ7 104 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 SPO11Q9Y5K1 396 aa6.14□□□□□ -1.43
SMC4-218ENST00000486711 ALDH1L1O75891 902 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 SLC9A1P19634 815 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 SCNN1GP51170 649 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 BCAR1P56945 870 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 EPHA7Q15375 998 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 ELAVL1Q15717 326 aaKnown RBP6.13□□□□□ -1.43
SMC4-218ENST00000486711 KRT40Q6A162 431 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 Q6ZRM9 215 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 CLEC14AQ86T13 490 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 GSPT2Q8IYD1 628 aaKnown RBP6.13□□□□□ -1.43
SMC4-218ENST00000486711 PLA2G15Q8NCC3 412 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 COG1Q8WTW3 980 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 SLC5A5Q92911 643 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 C16orf92Q96LL3 132 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 TUBGCP5Q96RT8 1024 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 PRRX2Q99811 253 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 IL23AQ9NPF7 189 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 TOMM22Q9NS69 142 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 H2AFY2Q9P0M6 372 aaPredicted RBP6.13□□□□□ -1.43
SMC4-218ENST00000486711 RCAN3Q9UKA8 241 aa6.13□□□□□ -1.43
SMC4-218ENST00000486711 UBE2QL1A1L167 161 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 MAFGO15525 162 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 PRKD3O94806 890 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 VSIG10L2P0DP72 767 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 LSP1P33241 339 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 MRGPRGQ86SM5 289 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 ZZZ3Q8IYH5 903 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 ASPSCR1Q9BZE9 553 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 HAPLN2Q9GZV7 340 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 SLC2A4RGQ9NR83 387 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 TRHDEQ9UKU6 1024 aa6.12□□□□□ -1.43
SMC4-218ENST00000486711 WASHC2AQ641Q2 1341 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 DAPK3O43293 454 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 TOX4O94842 621 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 JUNP05412 331 aaKnown RBP6.11□□□□□ -1.43
SMC4-218ENST00000486711 EPHB1P54762 984 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 SMAD3P84022 425 aaKnown RBP6.11□□□□□ -1.43
SMC4-218ENST00000486711 ADCY1Q08828 1119 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 TTF1Q15361 905 aaPredicted RBP6.11□□□□□ -1.43
SMC4-218ENST00000486711 FKBP15Q5T1M5 1219 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 SYDE2Q5VT97 1194 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 BROXQ5VW32 411 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 CREB3L3Q68CJ9 461 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 MFSD5Q6N075 450 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 AHCYL2Q96HN2 611 aaKnown RBP6.11□□□□□ -1.43
SMC4-218ENST00000486711 ELF4Q99607 663 aaPredicted RBP6.11□□□□□ -1.43
SMC4-218ENST00000486711 GPR87Q9BY21 358 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 C14orf93Q9H972 538 aaKnown RBP6.11□□□□□ -1.43
SMC4-218ENST00000486711 DNAI1Q9UI46 699 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 SYNPO2Q9UMS6 1093 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 NOC2LQ9Y3T9 749 aaKnown RBP6.11□□□□□ -1.43
SMC4-218ENST00000486711 SPEF1Q9Y4P9 236 aa6.11□□□□□ -1.43
SMC4-218ENST00000486711 CD40P25942 277 aa6.1□□□□□ -1.43
SMC4-218ENST00000486711 NEK2P51955 445 aa6.1□□□□□ -1.43
SMC4-218ENST00000486711 PHC1P78364 1004 aa6.1□□□□□ -1.43
SMC4-218ENST00000486711 MYBPC3Q14896 1274 aa6.1□□□□□ -1.43
SMC4-218ENST00000486711 GPR158Q5T848 1215 aa6.1□□□□□ -1.43
SMC4-218ENST00000486711 ZNF627Q7L945 461 aa6.1□□□□□ -1.43
SMC4-218ENST00000486711 ARL8AQ96BM9 186 aa6.1□□□□□ -1.43
SMC4-218ENST00000486711 CCDC8Q9H0W5 538 aaPredicted RBP6.1□□□□□ -1.43
SMC4-218ENST00000486711 TGM5O43548 720 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 RAMP2O60895 175 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 MFAP3LO75121 409 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 IPO13O94829 963 aaKnown RBP6.09□□□□□ -1.43
SMC4-218ENST00000486711 PARNO95453 639 aaKnown RBP6.09□□□□□ -1.43
SMC4-218ENST00000486711 PTX3P26022 381 aaPredicted RBP6.09□□□□□ -1.43
SMC4-218ENST00000486711 PTGS2P35354 604 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 SLC25A3Q00325 362 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 ADCY2Q08462 1091 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 TOB2Q14106 344 aaPredicted RBP6.09□□□□□ -1.43
SMC4-218ENST00000486711 TERF2Q15554 542 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 TIGD7Q6NT04 549 aaPredicted RBP6.09□□□□□ -1.43
SMC4-218ENST00000486711 ZBTB46Q86UZ6 589 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 RASSF3Q86WH2 238 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 PHYKPLQ8IUZ5 450 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms