RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 FAM193BQ96PV7 902 aaPredicted RBP12.22□□□□□ -0.45
SNX21-211ENST00000486336 UHRF1Q96T88 793 aaPredicted RBP12.22□□□□□ -0.45
SNX21-211ENST00000486336 TRAIPQ9BWF2 469 aa12.22□□□□□ -0.45
SNX21-211ENST00000486336 EIF2AQ9BY44 585 aaKnown RBP12.22□□□□□ -0.45
SNX21-211ENST00000486336 TRIM6Q9C030 488 aaPredicted RBP12.22□□□□□ -0.45
SNX21-211ENST00000486336 TLR9Q9NR96 1032 aa12.22□□□□□ -0.45
SNX21-211ENST00000486336 SPG21Q9NZD8 308 aa12.22□□□□□ -0.45
SNX21-211ENST00000486336 KIAA1671Q9BY89 1806 aa12.22□□□□□ -0.45
SNX21-211ENST00000486336 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
SNX21-211ENST00000486336 B4GALT5O43286 388 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 NCK2O43639 380 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 NPTXRO95502 500 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 EYA4O95677 639 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 ARF4P18085 180 aaPredicted RBP12.21□□□□□ -0.45
SNX21-211ENST00000486336 PPM1AP35813 382 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 NRIP1P48552 1158 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 BCAR1P56945 870 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 ERVFC1P60507 584 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 UBE3AQ05086 875 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 PCBP1Q15365 356 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNX21-211ENST00000486336 CLUL1Q15846 466 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 PLPP4Q5VZY2 271 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 AGMOQ6ZNB7 445 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 BRAPQ7Z569 592 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 MRPL10Q7Z7H8 261 aaKnown RBP12.21□□□□□ -0.45
SNX21-211ENST00000486336 ADGRD2Q7Z7M1 963 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
SNX21-211ENST00000486336 BSNDQ8WZ55 320 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 MRPS27Q92552 414 aaKnown RBP12.21□□□□□ -0.45
SNX21-211ENST00000486336 PABPC5Q96DU9 382 aaKnown RBP12.21□□□□□ -0.45
SNX21-211ENST00000486336 MMTAG2Q9BU76 263 aaKnown RBP12.21□□□□□ -0.45
SNX21-211ENST00000486336 CSRNP2Q9H175 543 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 C2orf40Q9H1Z8 148 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 TLE6Q9H808 572 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 RSAD1Q9HA92 442 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 ENTPD7Q9NQZ7 604 aa12.21□□□□□ -0.45
SNX21-211ENST00000486336 REV3LO60673 3130 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 CCDC169A6NNP5 214 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 PER2O15055 1255 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 POMCP01189 267 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 NCLP19338 710 aaKnown RBP12.2□□□□□ -0.46
SNX21-211ENST00000486336 PPP2R5AQ15172 486 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 AMHR2Q16671 573 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 LEXMQ3ZCV2 418 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 ARL6IP4Q66PJ3 421 aaKnown RBP12.2□□□□□ -0.46
SNX21-211ENST00000486336 TMC7Q7Z402 723 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 HACE1Q8IYU2 909 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 SMG8Q8ND04 991 aaKnown RBP12.2□□□□□ -0.46
SNX21-211ENST00000486336 CNNM3Q8NE01 707 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 KIFAP3Q92845 792 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 CCDC51Q96ER9 411 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 TMEM169Q96HH4 297 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 NFKBIZQ9BYH8 718 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 NRDE2Q9H7Z3 1164 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 TBC1D13Q9NVG8 400 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 PRMT7Q9NVM4 692 aaPredicted RBP12.2□□□□□ -0.46
SNX21-211ENST00000486336 PARP2Q9UGN5 583 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 HES2Q9Y543 173 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 IPPQ9Y573 584 aa12.2□□□□□ -0.46
SNX21-211ENST00000486336 CNTNAP2Q9UHC6 1331 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 TNFRSF10AO00220 468 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 LINC01565O15544 149 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 HIP1RO75146 1068 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 BMP15O95972 392 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 PRKCBP05771 671 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 SYT1P21579 422 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 NAMPTP43490 491 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 NDUFV1P49821 464 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 CEBPZQ03701 1054 aaKnown RBP12.19□□□□□ -0.46
SNX21-211ENST00000486336 RAD51AP2Q09MP3 1159 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 PRPF4BQ13523 1007 aaKnown RBP12.19□□□□□ -0.46
SNX21-211ENST00000486336 SF3A1Q15459 793 aaKnown RBP12.19□□□□□ -0.46
SNX21-211ENST00000486336 MAPK6Q16659 721 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 PTCRAQ6ISU1 281 aaPredicted RBP12.19□□□□□ -0.46
SNX21-211ENST00000486336 SLC27A1Q6PCB7 646 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 KCNK18Q7Z418 384 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 CABP7Q86V35 215 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 ZNF280BQ86YH2 543 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 HSCBQ8IWL3 235 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 SLC39A11Q8N1S5 342 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 TMEM87AQ8NBN3 555 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 RASSF8Q8NHQ8 419 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.19□□□□□ -0.46
SNX21-211ENST00000486336 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
SNX21-211ENST00000486336 PNMA5Q96PV4 448 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 GAD1Q99259 594 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 TCF25Q9BQ70 676 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 RUSC1Q9BVN2 902 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 NT5C3AQ9H0P0 336 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 KANSL3Q9P2N6 904 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 LZTS1Q9Y250 596 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 PLXNA4Q9HCM2 1894 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 BRWD1Q9NSI6 2320 aa12.19□□□□□ -0.46
SNX21-211ENST00000486336 SFI1A8K8P3 1242 aa12.18□□□□□ -0.46
SNX21-211ENST00000486336 N4BP3O15049 544 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms