RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 NRBP2Q9NSY0 501 aa10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 WRAP73Q9P2S5 460 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 PRKAG3Q9UGI9 489 aa10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 SEPT9Q9UHD8 586 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 PCDHA4Q9UN74 947 aa10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 CEP131Q9UPN4 1083 aa10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 USP15Q9Y4E8 981 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 PCDHB12Q9Y5F1 795 aa10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 ZDBF2Q9HCK1 2354 aa10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 WDFY4Q6ZS81 3184 aa10.48□□□□□ -0.73
TMEM39A-208ENST00000486159 A0A087WZ62 844 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 ZBTB39O15060 712 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 SPTLC2O15270 562 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 MAGEB2O15479 319 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 NCK2O43639 380 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 B4GALT3O60512 393 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 ALADP13716 330 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 DARSP14868 501 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 ME1P48163 572 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 FOSBP53539 338 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 NPEPPSP55786 919 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 COASYQ13057 564 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 KCNC3Q14003 757 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 DUSP6Q16828 381 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 Q4G0T1 1027 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 SYCE2Q6PIF2 218 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 KCNT2Q6UVM3 1135 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 RBM43Q6ZSC3 357 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 ZNF598Q86UK7 904 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 SMRP1Q8NCR6 262 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 CCDC148Q8NFR7 591 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 AUTS2Q8WXX7 1259 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 MBOAT7Q96N66 472 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 RIT2Q99578 217 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 FDXACB1Q9BRP7 624 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 TMEM117Q9H0C3 514 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 CLSTN2Q9H4D0 955 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 ELAC1Q9H777 363 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 TCEAL9Q9UHQ7 104 aa10.47□□□□□ -0.73
TMEM39A-208ENST00000486159 TRIOO75962 3097 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 CYP3A7-CYP3A51PA0A087WV96 503 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 A0A087WWV3 80 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 IGKV6-21A0A0C4DH24 114 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 WEE2P0C1S8 567 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 CCDC192P0DO97 292 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 CYP3A7P24462 503 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 KRT2P35908 639 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 AFF1P51825 1210 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 FAM160A1Q05DH4 1040 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 TBC1D8BQ0IIM8 1120 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 ANO5Q75V66 913 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 DIS3L2Q8IYB7 885 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 BCL7CQ8WUZ0 217 aaPredicted RBP10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 NLRP7Q8WX94 980 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 MRPS27Q92552 414 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 RPGRIP1Q96KN7 1286 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 FAM167AQ96KS9 214 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 SCLT1Q96NL6 688 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 MAP7D2Q96T17 732 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 TCF25Q9BQ70 676 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 PHF20Q9BVI0 1012 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 NIFKQ9BYG3 293 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 S1PR5Q9H228 398 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 TNMDQ9H2S6 317 aa10.46□□□□□ -0.73
TMEM39A-208ENST00000486159 A0A0U1RQF3 1178 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 LOC730098B7Z3J9 87 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 WNT7AO00755 349 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 KINO60870 393 aaKnown RBP10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 ZSCAN20P17040 1043 aaPredicted RBP10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 LAG3P18627 525 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 LIG1P18858 919 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 CMA1P23946 247 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 TMOD1P28289 359 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 TECP42680 631 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 TRAPPC10P48553 1259 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 FOXK2Q01167 660 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 PLCB3Q01970 1234 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 CCDC173Q0VFZ6 552 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 LETM2Q2VYF4 491 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 HERC4Q5GLZ8 1057 aaPredicted RBP10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 MCTP2Q6DN12 878 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 RHPN2Q8IUC4 686 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 SLC39A11Q8N1S5 342 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 C12orf76Q8N812 135 aaPredicted RBP10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 SUSD6Q92537 303 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 HAS1Q92839 578 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 FBXL18Q96ME1 805 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 PHOX2BQ99453 314 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 AAASQ9NRG9 546 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 DACT1Q9NYF0 836 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 SUCLA2Q9P2R7 463 aaPredicted RBP10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 DDX25Q9UHL0 483 aaKnown RBP10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 VAV3Q9UKW4 847 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 NOL7Q9UMY1 257 aaKnown RBP10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 PCDHA7Q9UN72 937 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 FAM50BQ9Y247 325 aa10.45□□□□□ -0.74
TMEM39A-208ENST00000486159 TECTAO75443 2155 aa10.44□□□□□ -0.74
TMEM39A-208ENST00000486159 FAM237AA0A1B0GTK4 181 aa10.44□□□□□ -0.74
TMEM39A-208ENST00000486159 CUTAO60888 179 aa10.44□□□□□ -0.74
TMEM39A-208ENST00000486159 MAFO75444 373 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms