RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 FAN1Q9Y2M0 1017 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 HCFC2Q9Y5Z7 792 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 IRAK3Q9Y616 596 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 CNTNAP2Q9UHC6 1331 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.33■□□□□ 0.04
SCAF4-206ENST00000485790 CTDNEP1O95476 244 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 CTSAP10619 480 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 ITGA4P13612 1032 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 NEK4P51957 841 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 CYP4A11Q02928 519 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 POU5F1BQ06416 359 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 EMC2Q15006 297 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 CCDC51Q96ER9 411 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 HSD17B14Q9BPX1 270 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 EIF2AK1Q9BQI3 630 aaKnown RBP15.33■□□□□ 0.04
SCAF4-206ENST00000485790 TMEM175Q9BSA9 504 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 NRDE2Q9H7Z3 1164 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 RSAD1Q9HA92 442 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 SSX2IPQ9Y2D8 614 aa15.33■□□□□ 0.04
SCAF4-206ENST00000485790 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 DGAT1O75907 488 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 LYPLA2O95372 231 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 FDPSP14324 419 aaKnown RBP15.32■□□□□ 0.04
SCAF4-206ENST00000485790 HOXA11P31270 313 aaPredicted RBP15.32■□□□□ 0.04
SCAF4-206ENST00000485790 TXKP42681 527 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 NR5A1Q13285 461 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 ME3Q16798 604 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 ELMSAN1Q6PJG2 1045 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 CABP7Q86V35 215 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 GTF3C6Q969F1 213 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 FBXL18Q96ME1 805 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 TTC12Q9H892 705 aaPredicted RBP15.32■□□□□ 0.04
SCAF4-206ENST00000485790 WRAP73Q9P2S5 460 aaPredicted RBP15.32■□□□□ 0.04
SCAF4-206ENST00000485790 DPP7Q9UHL4 492 aa15.32■□□□□ 0.04
SCAF4-206ENST00000485790 BTBD18B2RXH4 712 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 INO80B-WBP1J3KQ70 363 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 NEMFO60524 1076 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 NCLP19338 710 aaKnown RBP15.31■□□□□ 0.04
SCAF4-206ENST00000485790 KLRC2P26717 231 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 SIGLEC14Q08ET2 396 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 PTPN21Q16825 1174 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 NOTUMQ6P988 496 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 ZNF280BQ86YH2 543 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 PLCD3Q8N3E9 789 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 TRIM6Q9C030 488 aaPredicted RBP15.31■□□□□ 0.04
SCAF4-206ENST00000485790 ZBP1Q9H171 429 aa15.31■□□□□ 0.04
SCAF4-206ENST00000485790 MRPL17Q9NRX2 175 aaKnown RBP15.31■□□□□ 0.04
SCAF4-206ENST00000485790 BMP2KQ9NSY1 1161 aaPredicted RBP15.31■□□□□ 0.04
SCAF4-206ENST00000485790 ZBTB39O15060 712 aa15.3■□□□□ 0.04
SCAF4-206ENST00000485790 SLC11A1P49279 550 aa15.3■□□□□ 0.04
SCAF4-206ENST00000485790 PTENP60484 403 aa15.3■□□□□ 0.04
SCAF4-206ENST00000485790 SPIRE1Q08AE8 756 aa15.3■□□□□ 0.04
SCAF4-206ENST00000485790 EARS2Q5JPH6 523 aaKnown RBP15.3■□□□□ 0.04
SCAF4-206ENST00000485790 DIS3L2Q8IYB7 885 aaKnown RBP15.3■□□□□ 0.04
SCAF4-206ENST00000485790 UBALD2Q8IYN6 164 aa15.3■□□□□ 0.04
SCAF4-206ENST00000485790 FBXL6Q8N531 539 aa15.3■□□□□ 0.04
SCAF4-206ENST00000485790 IRF2BPLQ9H1B7 796 aa15.3■□□□□ 0.04
SCAF4-206ENST00000485790 MINDY3Q9H8M7 445 aa15.3■□□□□ 0.04
SCAF4-206ENST00000485790 DNAJB4Q9UDY4 337 aa15.3■□□□□ 0.04
SCAF4-206ENST00000485790 DBR1Q9UK59 544 aaKnown RBP15.3■□□□□ 0.04
SCAF4-206ENST00000485790 NRP1O14786 923 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 DDHD2O94830 711 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 POMCP01189 267 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 UBXN11Q5T124 520 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 RARS2Q5T160 578 aaKnown RBP15.29■□□□□ 0.04
SCAF4-206ENST00000485790 KIAA1841Q6NSI8 718 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 ALYREFQ86V81 257 aaKnown RBP15.29■□□□□ 0.04
SCAF4-206ENST00000485790 ERMNQ8TAM6 284 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 AUTS2Q8WXX7 1259 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 TNFRSF25Q93038 417 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 ACSF2Q96CM8 615 aaPredicted RBP15.29■□□□□ 0.04
SCAF4-206ENST00000485790 NACC1Q96RE7 527 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 COLEC11Q9BWP8 271 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 CSRNP2Q9H175 543 aa15.29■□□□□ 0.04
SCAF4-206ENST00000485790 DAXXQ9UER7 740 aaPredicted RBP15.29■□□□□ 0.04
SCAF4-206ENST00000485790 ARL5CA6NH57 179 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 MEIS3P2A8K0S8 358 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 DTNBO60941 627 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 ATP2B1P20020 1258 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 ARL2P36404 184 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 OR1G1P47890 313 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 TMEM173Q86WV6 379 aaPredicted RBP15.28■□□□□ 0.04
SCAF4-206ENST00000485790 IFNLR1Q8IU57 520 aaPredicted RBP15.28■□□□□ 0.04
SCAF4-206ENST00000485790 C12orf76Q8N812 135 aaPredicted RBP15.28■□□□□ 0.04
SCAF4-206ENST00000485790 KREMEN2Q8NCW0 462 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 NSUN7Q8NE18 718 aaKnown RBP15.28■□□□□ 0.04
SCAF4-206ENST00000485790 SLC22A17Q8WUG5 538 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 MTMR9Q96QG7 549 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 NFKBIZQ9BYH8 718 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 LIMCH1Q9UPQ0 1083 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 USTQ9Y2C2 406 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 GIT1Q9Y2X7 761 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 IPPQ9Y573 584 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 NLRC5Q86WI3 1866 aa15.28■□□□□ 0.04
SCAF4-206ENST00000485790 FAM205CA6NFA0 338 aa15.27■□□□□ 0.04
SCAF4-206ENST00000485790 TSPAN1O60635 241 aa15.27■□□□□ 0.04
SCAF4-206ENST00000485790 SSBP05455 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
SCAF4-206ENST00000485790 EPCAMP16422 314 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms