RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 PDCL3Q9H2J4 239 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 NSUN3Q9H649 340 aaKnown RBP5.08□□□□□ -1.6
RTN4-213ENST00000485749 ATP6V0A4Q9HBG4 840 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 VTA1Q9NP79 307 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 NMRK2Q9NPI5 230 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 DCP1AQ9NPI6 582 aaPredicted RBP5.08□□□□□ -1.6
RTN4-213ENST00000485749 CHST7Q9NS84 486 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 MKS1Q9NXB0 559 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 GFOD1Q9NXC2 390 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 KCTD5Q9NXV2 234 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 SAGE1Q9NXZ1 904 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 CFAP45Q9UL16 551 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 KCNH3Q9ULD8 1083 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 ZBTB21Q9ULJ3 1066 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 PTPN22Q9Y2R2 807 aa5.08□□□□□ -1.6
RTN4-213ENST00000485749 FRMPD2Q68DX3 1309 aaPredicted RBP5.07□□□□□ -1.6
RTN4-213ENST00000485749 TRBV23OR9-2A0A075B6M9 112 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 ABHD14A-ACY1A0A1B0GW23 586 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 PTPDC1A2A3K4 754 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 KLHL33A6NCF5 533 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 C2orf71A6NGG8 1288 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.07□□□□□ -1.6
RTN4-213ENST00000485749 MUSKO15146 869 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 KIF20AO95235 890 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 ASGR2P07307 311 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 ATP6V1B1P15313 513 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 HOXD12P35452 270 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 CSE1LP55060 971 aaKnown RBP5.07□□□□□ -1.6
RTN4-213ENST00000485749 LACTBP83111 547 aaPredicted RBP5.07□□□□□ -1.6
RTN4-213ENST00000485749 ADCY1Q08828 1119 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 ZBTB17Q13105 803 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 LRRC32Q14392 662 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 BECN1Q14457 450 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 GRM3Q14832 879 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 FILIP1LQ4L180 1135 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 CDKAL1Q5VV42 579 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 FYB2Q5VWT5 728 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 CWF19L1Q69YN2 538 aaKnown RBP5.07□□□□□ -1.6
RTN4-213ENST00000485749 ABRAXAS1Q6UWZ7 409 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 FASTKD5Q7L8L6 764 aaKnown RBP5.07□□□□□ -1.6
RTN4-213ENST00000485749 SRGAP1Q7Z6B7 1085 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 CDH24Q86UP0 819 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 AMIGO3Q86WK7 504 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 NKAPQ8N5F7 415 aaKnown RBP5.07□□□□□ -1.6
RTN4-213ENST00000485749 LSMEM1Q8N8F7 131 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 TRIML1Q8N9V2 468 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 IL17REQ8NFR9 667 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 ABHD4Q8TB40 342 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 SLC35G2Q8TBE7 412 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 BRSK1Q8TDC3 778 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 POF1BQ8WVV4 589 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 FBXW5Q969U6 566 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 SYTL4Q96C24 671 aaPredicted RBP5.07□□□□□ -1.6
RTN4-213ENST00000485749 CEP95Q96GE4 821 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 HIC2Q96JB3 615 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 UROC1Q96N76 676 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 GBP4Q96PP9 640 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 GTPBP4Q9BZE4 634 aaKnown RBP5.07□□□□□ -1.6
RTN4-213ENST00000485749 UNC45AQ9H3U1 944 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 ATP13A1Q9HD20 1204 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 ANLNQ9NQW6 1124 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 SEMA3GQ9NS98 782 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 EXOC1Q9NV70 894 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 KLHL11Q9NVR0 708 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 GPATCH2Q9NW75 528 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 C14orf119Q9NWQ9 140 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 FAM184BQ9ULE4 1060 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 AGTPBP1Q9UPW5 1226 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 TMX2Q9Y320 296 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 PCDHGB3Q9Y5G1 929 aa5.07□□□□□ -1.6
RTN4-213ENST00000485749 NCANO14594 1321 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 B8ZZF3 427 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 H3BS24 57 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 BOLA2-SMG1P6H3BVE0 249 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 INO80B-WBP1J3KQ70 363 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 STXBP3O00186 592 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 RTCAO00442 366 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 SGTAO43765 313 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 HRGP04196 525 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 CCDC172P0C7W6 258 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 C1QTNF9P0C862 333 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 TSPY4P0CV99 314 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 TSPY10P0CW01 314 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 STMN1P16949 149 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 CAPN3P20807 821 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 SMARCA1P28370 1054 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 LSP1P33241 339 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 CLNS1AP54105 237 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 AK2P54819 239 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 MECOMQ03112 1051 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 SNW1Q13573 536 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 ODF1Q14990 250 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 TERF2Q15554 542 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 KCNA10Q16322 511 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 DPY19L1Q2PZI1 675 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 CREB3L3Q68CJ9 461 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 RCSD1Q6JBY9 416 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 B3GNT9Q6UX72 402 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 CYP26C1Q6V0L0 522 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 RTL10Q7L3V2 364 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms