RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 FAM43BQ6ZT52 329 aaPredicted RBP17.41■□□□□ 0.38
APOE-205ENST00000485628 FAM228AQ86W67 206 aa17.41■□□□□ 0.38
APOE-205ENST00000485628 CCDC155Q8N6L0 562 aa17.41■□□□□ 0.38
APOE-205ENST00000485628 USP38Q8NB14 1042 aa17.41■□□□□ 0.38
APOE-205ENST00000485628 DHTKD1Q96HY7 919 aaPredicted RBP17.41■□□□□ 0.38
APOE-205ENST00000485628 PPP1R16BQ96T49 567 aa17.41■□□□□ 0.38
APOE-205ENST00000485628 INO80BQ9C086 356 aaPredicted RBP17.41■□□□□ 0.38
APOE-205ENST00000485628 SEMA6BQ9H3T3 888 aa17.41■□□□□ 0.38
APOE-205ENST00000485628 AGO3Q9H9G7 860 aaKnown RBP17.41■□□□□ 0.38
APOE-205ENST00000485628 ANO10Q9NW15 660 aa17.41■□□□□ 0.38
APOE-205ENST00000485628 TRAF3IP3Q9Y228 551 aa17.41■□□□□ 0.38
APOE-205ENST00000485628 NOC2LQ9Y3T9 749 aaKnown RBP17.41■□□□□ 0.38
APOE-205ENST00000485628 CSDE1O75534 798 aaKnown RBP17.4■□□□□ 0.38
APOE-205ENST00000485628 CXCL10P02778 98 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 CCDC192P0DO97 292 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 PROZP22891 400 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
APOE-205ENST00000485628 SNRPFP62306 86 aaKnown RBP17.4■□□□□ 0.38
APOE-205ENST00000485628 STX1AQ16623 288 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 NFIL3Q16649 462 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 MAPK6Q16659 721 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 LRSAM1Q6UWE0 723 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 ZPBP2Q6X784 338 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 STXBP4Q6ZWJ1 553 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 LRRC8DQ7L1W4 858 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 ZBTB8OSQ8IWT0 167 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 ZC3H3Q8IXZ2 948 aaKnown RBP17.4■□□□□ 0.38
APOE-205ENST00000485628 ACCSQ96QU6 501 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 IKZF4Q9H2S9 585 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 HIPK3Q9H422 1215 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 TMEM206Q9H813 350 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 ERVK-5Q9HDB9 667 aa17.4■□□□□ 0.38
APOE-205ENST00000485628 PRMT7Q9NVM4 692 aaPredicted RBP17.4■□□□□ 0.38
APOE-205ENST00000485628 SCN5AQ14524 2016 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 A0A1B0GUA9 196 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 CCDC85CA6NKD9 419 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 M0QZ92 97 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 PDXKO00764 312 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 TSPAN1O60635 241 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 NBNO60934 754 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 PARNO95453 639 aaKnown RBP17.39■□□□□ 0.37
APOE-205ENST00000485628 TIMP1P01033 207 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 PRKCBP05771 671 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 CCNE1P24864 410 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 ADSSP30520 456 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 PMS1P54277 932 aaKnown RBP17.39■□□□□ 0.37
APOE-205ENST00000485628 MCCD1P59942 119 aaPredicted RBP17.39■□□□□ 0.37
APOE-205ENST00000485628 TSHZ1Q6ZSZ6 1077 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 C11orf57Q6ZUT1 292 aaPredicted RBP17.39■□□□□ 0.37
APOE-205ENST00000485628 C12orf56Q8IXR9 622 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 ACO2Q99798 780 aaKnown RBP17.39■□□□□ 0.37
APOE-205ENST00000485628 TMEM39AQ9NV64 488 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 DMAC2Q9NW81 257 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 MAPK8IP1Q9UQF2 711 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 CNTNAP2Q9UHC6 1331 aa17.39■□□□□ 0.37
APOE-205ENST00000485628 ANKRD63C9JTQ0 380 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 INO80B-WBP1J3KQ70 363 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 B4GALT5O43286 388 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 KIF20AO95235 890 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 CTSHP09668 335 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 ARF4P18085 180 aaPredicted RBP17.38■□□□□ 0.37
APOE-205ENST00000485628 DSC3Q14574 896 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 TTI2Q6NXR4 508 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 DUSP9Q99956 384 aaKnown RBP17.38■□□□□ 0.37
APOE-205ENST00000485628 BPIFA3Q9BQP9 254 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 HAPLN2Q9GZV7 340 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 GZF1Q9H116 711 aaPredicted RBP17.38■□□□□ 0.37
APOE-205ENST00000485628 AGPAT5Q9NUQ2 364 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 TYW1Q9NV66 732 aaKnown RBP17.38■□□□□ 0.37
APOE-205ENST00000485628 CGNQ9P2M7 1197 aaKnown RBP17.38■□□□□ 0.37
APOE-205ENST00000485628 USP20Q9Y2K6 914 aa17.38■□□□□ 0.37
APOE-205ENST00000485628 RBAK-RBAKDNI3L0D1 243 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 FGFR4P22455 802 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 AXLP30530 894 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 CYP2C18P33260 490 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 MYBPC2Q14324 1141 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 PLEKHG4Q58EX7 1191 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 ANKRD40Q6AI12 368 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 SLC9A9Q8IVB4 645 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 P2RX5Q93086 422 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 TARS2Q9BW92 718 aaKnown RBP17.37■□□□□ 0.37
APOE-205ENST00000485628 TRAIPQ9BWF2 469 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 MRPL4Q9BYD3 311 aaKnown RBP17.37■□□□□ 0.37
APOE-205ENST00000485628 GBP3Q9H0R5 595 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 TMX1Q9H3N1 280 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 RWDD2AQ9UIY3 292 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 PADI3Q9ULW8 664 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 ST3GAL5Q9UNP4 418 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 GINS2Q9Y248 185 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 TNFSF13BQ9Y275 285 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 LTBP2Q14767 1821 aa17.37■□□□□ 0.37
APOE-205ENST00000485628 A0A0B4J269 797 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 TISP43B9A030 160 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 PSMA7O14818 248 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 GPR182O15218 404 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 FAM189A1O60320 539 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 RPS6KA5O75582 802 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 TOM1L1O75674 476 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 GHRP10912 638 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 SFPQP23246 707 aaKnown RBP eCLIP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms