RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 DSC3Q14574 896 aa21.93■■□□□ 1.1
COL6A2-208ENST00000485591 C9orf50Q5SZB4 431 aa21.93■■□□□ 1.1
COL6A2-208ENST00000485591 RASIP1Q5U651 963 aa21.93■■□□□ 1.1
COL6A2-208ENST00000485591 CHRDL2Q6WN34 429 aa21.93■■□□□ 1.1
COL6A2-208ENST00000485591 TAS1R3Q7RTX0 852 aa21.93■■□□□ 1.1
COL6A2-208ENST00000485591 LINC01599Q8WXQ3 324 aa21.93■■□□□ 1.1
COL6A2-208ENST00000485591 TSPYL2Q9H2G4 693 aaPredicted RBP21.93■■□□□ 1.1
COL6A2-208ENST00000485591 CNTNAP2Q9UHC6 1331 aa21.93■■□□□ 1.1
COL6A2-208ENST00000485591 PIN4Q9Y237 131 aaKnown RBP21.93■■□□□ 1.1
COL6A2-208ENST00000485591 ACKR2O00590 384 aa21.92■■□□□ 1.1
COL6A2-208ENST00000485591 MGEA5O60502 916 aa21.92■■□□□ 1.1
COL6A2-208ENST00000485591 NMT1P30419 496 aaKnown RBP21.92■■□□□ 1.1
COL6A2-208ENST00000485591 WDR5P61964 334 aaKnown RBP21.92■■□□□ 1.1
COL6A2-208ENST00000485591 SHHQ15465 462 aa21.92■■□□□ 1.1
COL6A2-208ENST00000485591 ZNF720Q7Z2F6 126 aa21.92■■□□□ 1.1
COL6A2-208ENST00000485591 MRPL44Q9H9J2 332 aaKnown RBP21.92■■□□□ 1.1
COL6A2-208ENST00000485591 TTC3P53804 2025 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 B4GALT5O43286 388 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 PPP1R37O75864 691 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 RPN1P04843 607 aaKnown RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 EDN1P05305 212 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 ZSCAN20P17040 1043 aaPredicted RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 ARF4P18085 180 aaPredicted RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 HOXA11P31270 313 aaPredicted RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 MCM4P33991 863 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 GTF2BQ00403 316 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 NCBP1Q09161 790 aaKnown RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 STRN3Q13033 797 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 PNOCQ13519 176 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 PRPF4BQ13523 1007 aaKnown RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 ALCAMQ13740 583 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 RTN4RL1Q86UN2 441 aaPredicted RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 HVCN1Q96D96 273 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 RNPC3Q96LT9 517 aaKnown RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 ADAM2Q99965 735 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 RGS18Q9NS28 235 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 C1orf112Q9NSG2 853 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 TBC1D7Q9P0N9 293 aa21.91■■□□□ 1.1
COL6A2-208ENST00000485591 CXXC1Q9P0U4 656 aaPredicted RBP21.91■■□□□ 1.1
COL6A2-208ENST00000485591 ZBBXA8MT70 800 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 ENPP3O14638 875 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 KCNJ6P48051 423 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 KMT5BQ4FZB7 885 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 FAM26FQ5R3K3 315 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 NOTUMQ6P988 496 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 TDHQ8IZJ6 230 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 CCDC51Q96ER9 411 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 TRAIPQ9BWF2 469 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 STRA6Q9BX79 667 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 EXOC1Q9NV70 894 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 TBX20Q9UMR3 447 aa21.9■■□□□ 1.1
COL6A2-208ENST00000485591 GCNT3O95395 438 aa21.89■■□□□ 1.09
COL6A2-208ENST00000485591 ZC2HC1CQ53FD0 456 aaPredicted RBP21.89■■□□□ 1.09
COL6A2-208ENST00000485591 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.89■■□□□ 1.09
COL6A2-208ENST00000485591 SLC24A5Q71RS6 500 aa21.89■■□□□ 1.09
COL6A2-208ENST00000485591 MAP4K3Q8IVH8 894 aa21.89■■□□□ 1.09
COL6A2-208ENST00000485591 HPS3Q969F9 1004 aa21.89■■□□□ 1.09
COL6A2-208ENST00000485591 CCDC47Q96A33 483 aaKnown RBP21.89■■□□□ 1.09
COL6A2-208ENST00000485591 CPB2Q96IY4 423 aa21.89■■□□□ 1.09
COL6A2-208ENST00000485591 MRPL4Q9BYD3 311 aaKnown RBP21.89■■□□□ 1.09
COL6A2-208ENST00000485591 FGFBP2Q9BYJ0 223 aa21.89■■□□□ 1.09
COL6A2-208ENST00000485591 GBF1Q92538 1859 aa21.89■■□□□ 1.09
COL6A2-208ENST00000485591 A0A1B0GUA9 196 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 A0A1W2PPC1 479 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 TTLL13PA6NNM8 815 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 C9IYK1 514 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 MBD3O95983 291 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 AMHP03971 560 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 CASP5P51878 434 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 DEFB103AP81534 67 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 PSMD2Q13200 908 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 KCNB1Q14721 858 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 NT5DC1Q5TFE4 455 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 TWF2Q6IBS0 349 aaKnown RBP21.88■■□□□ 1.09
COL6A2-208ENST00000485591 STXBP4Q6ZWJ1 553 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 SPATA20Q8TB22 786 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 GPT2Q8TD30 523 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 SLC9A7Q96T83 725 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 PCDHB13Q9Y5F0 798 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 SLC4A7Q9Y6M7 1214 aa21.88■■□□□ 1.09
COL6A2-208ENST00000485591 N4BP3O15049 544 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 EIF3DO15371 548 aaKnown RBP eCLIP21.87■■□□□ 1.09
COL6A2-208ENST00000485591 RHOBTB3O94955 611 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 SMC2O95347 1197 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 MYBP10242 640 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 SARSP49591 514 aaKnown RBP21.87■■□□□ 1.09
COL6A2-208ENST00000485591 RAB27AP51159 221 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 TMEM132AQ24JP5 1023 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 UBXN11Q5T124 520 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 ATF7IP2Q5U623 682 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 ZPBP2Q6X784 338 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 GSDMAQ96QA5 445 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 ACO2Q99798 780 aaKnown RBP21.87■■□□□ 1.09
COL6A2-208ENST00000485591 PDZD7Q9H5P4 517 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 TNFSF13BQ9Y275 285 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 USP20Q9Y2K6 914 aa21.87■■□□□ 1.09
COL6A2-208ENST00000485591 UBE4BO95155 1302 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 A0A0U1RQF3 1178 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 PIGRP01833 764 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms