RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 LPIN1Q14693 890 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 MBTPS1Q14703 1052 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 AMHR2Q16671 573 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 KNOP1Q1ED39 458 aaKnown RBP19.3■□□□□ 0.68
CHMP3-207ENST00000485465 FAM228AQ86W67 206 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 SYCP3Q8IZU3 236 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 TRIM43Q96BQ3 446 aaPredicted RBP19.3■□□□□ 0.68
CHMP3-207ENST00000485465 DHTKD1Q96HY7 919 aaPredicted RBP19.3■□□□□ 0.68
CHMP3-207ENST00000485465 PRIMPOLQ96LW4 560 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 OSBPL7Q9BZF2 842 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 PRDM5Q9NQX1 630 aaPredicted RBP19.3■□□□□ 0.68
CHMP3-207ENST00000485465 DACH1Q9UI36 760 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 EXOC7Q9UPT5 735 aa19.3■□□□□ 0.68
CHMP3-207ENST00000485465 RPS6KA5O75582 802 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 EDN1P05305 212 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 GHRP10912 638 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 CYP2C18P33260 490 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 ZNF445P59923 1031 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 PRPF4BQ13523 1007 aaKnown RBP19.29■□□□□ 0.68
CHMP3-207ENST00000485465 KLHL10Q6JEL2 608 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 TSHZ1Q6ZSZ6 1077 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 CATSPER4Q7RTX7 472 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 USP38Q8NB14 1042 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 ANP32EQ9BTT0 268 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 MRPL4Q9BYD3 311 aaKnown RBP19.29■□□□□ 0.68
CHMP3-207ENST00000485465 WNT8AQ9H1J5 351 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 KCTD10Q9H3F6 313 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 AGO3Q9H9G7 860 aaKnown RBP19.29■□□□□ 0.68
CHMP3-207ENST00000485465 USP20Q9Y2K6 914 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 ZMYM2Q9UBW7 1377 aa19.29■□□□□ 0.68
CHMP3-207ENST00000485465 TTLL13PA6NNM8 815 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 PSMA7O14818 248 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 GPR182O15218 404 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 B4GALT5O43286 388 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 TSPAN1O60635 241 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 ERLIN2O94905 339 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 PARNO95453 639 aaKnown RBP19.28■□□□□ 0.68
CHMP3-207ENST00000485465 TIMP1P01033 207 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 PIGRP01833 764 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 CCL23P55773 120 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 CT47A1Q5JQC4 288 aaPredicted RBP19.28■□□□□ 0.68
CHMP3-207ENST00000485465 LRSAM1Q6UWE0 723 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 BICD1Q96G01 975 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 ACO2Q99798 780 aaKnown RBP19.28■□□□□ 0.68
CHMP3-207ENST00000485465 TARS2Q9BW92 718 aaKnown RBP19.28■□□□□ 0.68
CHMP3-207ENST00000485465 IKZF4Q9H2S9 585 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 SEMA6BQ9H3T3 888 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 ERVK-5Q9HDB9 667 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 ST3GAL5Q9UNP4 418 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 SIP14410 1827 aa19.28■□□□□ 0.68
CHMP3-207ENST00000485465 CNTNAP2Q9UHC6 1331 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 TGFB1I1O43294 461 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 NBNO60934 754 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 CCNE1P24864 410 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 CD52P31358 61 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 NCBP1Q09161 790 aaKnown RBP19.27■□□□□ 0.68
CHMP3-207ENST00000485465 PAK2Q13177 524 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 GPNMBQ14956 572 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 ANO6Q4KMQ2 910 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 CENPPQ6IPU0 288 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 ZPBP2Q6X784 338 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 C11orf57Q6ZUT1 292 aaPredicted RBP19.27■□□□□ 0.68
CHMP3-207ENST00000485465 C7orf61Q8IZ16 206 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 NELFBQ8WX92 580 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 P2RX5Q93086 422 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 SCLYQ96I15 445 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 GBP3Q9H0R5 595 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 DNAJC25Q9H1X3 360 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 PADI3Q9ULW8 664 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 CTNND2Q9UQB3 1225 aa19.27■□□□□ 0.68
CHMP3-207ENST00000485465 ANKRD63C9JTQ0 380 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 RBAK-RBAKDNI3L0D1 243 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 PDXKO00764 312 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 HNRNPDLO14979 420 aaKnown RBP19.26■□□□□ 0.67
CHMP3-207ENST00000485465 EVI5O60447 810 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 RAG1P15918 1043 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 ARF4P18085 180 aaPredicted RBP19.26■□□□□ 0.67
CHMP3-207ENST00000485465 ITGB8P26012 769 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 ERCC5P28715 1186 aaPredicted RBP19.26■□□□□ 0.67
CHMP3-207ENST00000485465 AXLP30530 894 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 HOXA11P31270 313 aaPredicted RBP19.26■□□□□ 0.67
CHMP3-207ENST00000485465 LIG4P49917 911 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 SNRPFP62306 86 aaKnown RBP19.26■□□□□ 0.67
CHMP3-207ENST00000485465 NFX1Q12986 1120 aaKnown RBP19.26■□□□□ 0.67
CHMP3-207ENST00000485465 PAK1Q13153 545 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 ATF7IP2Q5U623 682 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 SLC39A4Q6P5W5 647 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 CPB2Q96IY4 423 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 AGPAT5Q9NUQ2 364 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 TYW1Q9NV66 732 aaKnown RBP19.26■□□□□ 0.67
CHMP3-207ENST00000485465 PRKAG2Q9UGJ0 569 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 RWDD2AQ9UIY3 292 aa19.26■□□□□ 0.67
CHMP3-207ENST00000485465 ALPK3Q96L96 1907 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 TISP43B9A030 160 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 CALUO43852 315 aaPredicted RBP19.25■□□□□ 0.67
CHMP3-207ENST00000485465 RFC2P35250 354 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 PMS1P54277 932 aaKnown RBP19.25■□□□□ 0.67
CHMP3-207ENST00000485465 STX17P56962 302 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 TMEM132AQ24JP5 1023 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 ZCWPW2Q504Y3 356 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms