RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 CATSPER3Q86XQ3 398 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 IFNLR1Q8IU57 520 aaPredicted RBP17.66■□□□□ 0.42
SIK3-211ENST00000485363 NOSTRINQ8IVI9 506 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 CNNM3Q8NE01 707 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 ERMNQ8TAM6 284 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 URGCPQ8TCY9 931 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 NRDE2Q9H7Z3 1164 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 NOL7Q9UMY1 257 aaKnown RBP17.66■□□□□ 0.42
SIK3-211ENST00000485363 CNTNAP2Q9UHC6 1331 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 TSPAN1O60635 241 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 USO1O60763 962 aaKnown RBP17.65■□□□□ 0.42
SIK3-211ENST00000485363 GPR37L1O60883 481 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 TRAPPC10P48553 1259 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 CAPSQ13938 189 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 RABEP1Q15276 862 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 NOTUMQ6P988 496 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 TMEM184AQ6ZMB5 413 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 AGMOQ6ZNB7 445 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 VN1R2Q8NFZ6 395 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 ASAP3Q8TDY4 903 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 CCDC51Q96ER9 411 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 NACC1Q96RE7 527 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 LRFN3Q9BTN0 628 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 POLR3CQ9BUI4 534 aaPredicted RBP17.65■□□□□ 0.42
SIK3-211ENST00000485363 RSAD1Q9HA92 442 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 UBN1Q9NPG3 1134 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 KANSL3Q9P2N6 904 aa17.65■□□□□ 0.42
SIK3-211ENST00000485363 DBR1Q9UK59 544 aaKnown RBP17.65■□□□□ 0.42
SIK3-211ENST00000485363 A0A087WWV3 80 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 ST18O60284 1047 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 MED24O75448 989 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 GALTP07902 379 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 NCLP19338 710 aaKnown RBP17.64■□□□□ 0.41
SIK3-211ENST00000485363 GLRA2P23416 452 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 RBM10P98175 930 aaKnown RBP17.64■□□□□ 0.41
SIK3-211ENST00000485363 MBTD1Q05BQ5 628 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 KCNC3Q14003 757 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 MRPL43Q8N983 215 aaKnown RBP17.64■□□□□ 0.41
SIK3-211ENST00000485363 IGSF21Q96ID5 467 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 NFKBIZQ9BYH8 718 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 GBP3Q9H0R5 595 aa17.64■□□□□ 0.41
SIK3-211ENST00000485363 POLR3FQ9H1D9 316 aaPredicted RBP17.64■□□□□ 0.41
SIK3-211ENST00000485363 USP15Q9Y4E8 981 aaPredicted RBP17.64■□□□□ 0.41
SIK3-211ENST00000485363 C2orf71A6NGG8 1288 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 DCXO43602 365 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 ITGA4P13612 1032 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 RPA1P27694 616 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 CA8P35219 290 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 HAUS3Q68CZ6 603 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 LLGL2Q6P1M3 1020 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 DDX53Q86TM3 631 aaKnown RBP17.63■□□□□ 0.41
SIK3-211ENST00000485363 VPS52Q8N1B4 723 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 MCPH1Q8NEM0 835 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 FAM193BQ96PV7 902 aaPredicted RBP17.63■□□□□ 0.41
SIK3-211ENST00000485363 UPF2Q9HAU5 1272 aaKnown RBP17.63■□□□□ 0.41
SIK3-211ENST00000485363 C11orf16Q9NQ32 467 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 DNAJB4Q9UDY4 337 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 KIF3AQ9Y496 699 aa17.63■□□□□ 0.41
SIK3-211ENST00000485363 FAM86C2PA6NEL3 165 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 CXCL14O95715 111 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 MUTP22033 750 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 U2AF2P26368 475 aaKnown RBP eCLIP17.62■□□□□ 0.418e-7■■■□□ 15
SIK3-211ENST00000485363 SLC11A1P49279 550 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 GIT2Q14161 759 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 AMHR2Q16671 573 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 ANKRD54Q6NXT1 300 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 POTEGQ6S5H5 508 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 MAEAQ7L5Y9 396 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 TMEM173Q86WV6 379 aaPredicted RBP17.62■□□□□ 0.41
SIK3-211ENST00000485363 ZNF280BQ86YH2 543 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 SMG8Q8ND04 991 aaKnown RBP17.62■□□□□ 0.41
SIK3-211ENST00000485363 CASP10Q92851 521 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 CPB2Q96IY4 423 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 TMEM175Q9BSA9 504 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 EIF2AQ9BY44 585 aaKnown RBP17.62■□□□□ 0.41
SIK3-211ENST00000485363 TRIM6Q9C030 488 aaPredicted RBP17.62■□□□□ 0.41
SIK3-211ENST00000485363 ZBP1Q9H171 429 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 CSRNP2Q9H175 543 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 STK39Q9UEW8 545 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 IPPQ9Y573 584 aa17.62■□□□□ 0.41
SIK3-211ENST00000485363 LRRIQ4A6NIV6 560 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 DDHD2O94830 711 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 POMCP01189 267 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 ALDH2P05091 517 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 CTSAP10619 480 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 HOXB8P17481 243 aaPredicted RBP17.61■□□□□ 0.41
SIK3-211ENST00000485363 ARF4P18085 180 aaPredicted RBP17.61■□□□□ 0.41
SIK3-211ENST00000485363 FXR2P51116 673 aaKnown RBP eCLIP17.61■□□□□ 0.41
SIK3-211ENST00000485363 AFF1P51825 1210 aaKnown RBP17.61■□□□□ 0.41
SIK3-211ENST00000485363 HACE1Q8IYU2 909 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 TMEM87AQ8NBN3 555 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 PHF7Q9BWX1 381 aaPredicted RBP17.61■□□□□ 0.41
SIK3-211ENST00000485363 GPRC5CQ9NQ84 441 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 RAPGEFL1Q9UHV5 662 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 HCFC2Q9Y5Z7 792 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 IRAK3Q9Y616 596 aa17.61■□□□□ 0.41
SIK3-211ENST00000485363 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.6■□□□□ 0.41
SIK3-211ENST00000485363 ARHGEF35A5YM69 484 aa17.6■□□□□ 0.41
SIK3-211ENST00000485363 B4GALT3O60512 393 aa17.6■□□□□ 0.41
SIK3-211ENST00000485363 CLASP2O75122 1294 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms