RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ITGA7Q13683 1181 aa22.41■■□□□ 1.18
VCPKMT-203ENST00000484763 MAPK6Q16659 721 aa22.41■■□□□ 1.18
VCPKMT-203ENST00000484763 GDF6Q6KF10 455 aaPredicted RBP22.41■■□□□ 1.18
VCPKMT-203ENST00000484763 NLRP7Q8WX94 980 aa22.41■■□□□ 1.18
VCPKMT-203ENST00000484763 SCLT1Q96NL6 688 aa22.41■■□□□ 1.18
VCPKMT-203ENST00000484763 PPP1R16BQ96T49 567 aa22.41■■□□□ 1.18
VCPKMT-203ENST00000484763 FDXACB1Q9BRP7 624 aaPredicted RBP22.41■■□□□ 1.18
VCPKMT-203ENST00000484763 PHF24Q9UPV7 400 aa22.41■■□□□ 1.18
VCPKMT-203ENST00000484763 A0A1W2PQ45 241 aaPredicted RBP22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 A0A1W2PQY0 241 aa22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 TISP43B9A030 160 aa22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 DNM1LO00429 736 aa22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 SLC16A3O15427 465 aaKnown RBP22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 PRKCBP05771 671 aa22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 LIG4P49917 911 aa22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 PTPN11Q06124 597 aaPredicted RBP22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 CCDC40Q4G0X9 1142 aa22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 ARMCX5Q6P1M9 558 aa22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 APTXQ7Z2E3 356 aaKnown RBP22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 DNAJB3Q8WWF6 145 aa22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 XPO4Q9C0E2 1151 aaKnown RBP22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 DMAC2Q9NW81 257 aa22.4■■□□□ 1.18
VCPKMT-203ENST00000484763 ANKRD63C9JTQ0 380 aa22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 INO80B-WBP1J3KQ70 363 aa22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 TPM3P06753 285 aa22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 MBTD1Q05BQ5 628 aa22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 ZNF710Q8N1W2 664 aa22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 NME8Q8N427 588 aa22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 MRFAP1L1Q96HT8 127 aa22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 ZNF333Q96JL9 665 aa22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 INO80BQ9C086 356 aaPredicted RBP22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 OGDHLQ9ULD0 1010 aa22.39■■□□□ 1.17
VCPKMT-203ENST00000484763 BRCA2P51587 3418 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 LRRC10BA6NIK2 292 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 MTIF2P46199 727 aaKnown RBP22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 CYP2J2P51589 502 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 MARSP56192 900 aaKnown RBP22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 CEP135Q66GS9 1140 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 SLC39A4Q6P5W5 647 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 CBWD1Q9BRT8 395 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 MRPL4Q9BYD3 311 aaKnown RBP22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 FZD8Q9H461 694 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 STARD7Q9NQZ5 370 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 PRMT7Q9NVM4 692 aaPredicted RBP22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 A0A1B0GTH6 734 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 TPM2P07951 284 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 EPB41P11171 864 aaKnown RBP22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 COPB1P53618 953 aaKnown RBP22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 TMEM62Q0P6H9 643 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 KIZQ2M2Z5 673 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 FILIP1LQ4L180 1135 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 ZPBP2Q6X784 338 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 ARMC5Q96C12 935 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 NAP1L5Q96NT1 182 aaPredicted RBP22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 TUBGCP2Q9BSJ2 902 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 MKNK1Q9BUB5 465 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 ADAMTS10Q9H324 1103 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 MINDY3Q9H8M7 445 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 TAB2Q9NYJ8 693 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 HSPBP1Q9NZL4 362 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 FRMD4BQ9Y2L6 1034 aa22.38■■□□□ 1.17
VCPKMT-203ENST00000484763 EXOC3O60645 756 aa22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 GPR32O75388 356 aa22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 AKAP3O75969 853 aa22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 EDN1P05305 212 aa22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 RPLP2P05387 115 aaKnown RBP22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 GARTP22102 1010 aa22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 ADSSP30520 456 aa22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 CCDC173Q0VFZ6 552 aa22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 SRGAP1Q7Z6B7 1085 aa22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 SERINC5Q86VE9 423 aa22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 TARS2Q9BW92 718 aaKnown RBP22.37■■□□□ 1.17
VCPKMT-203ENST00000484763 A0A0U1RQG5 324 aaPredicted RBP22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 ACKR2O00590 384 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 PRKCSHP14314 528 aaPredicted RBP22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 DEKP35659 375 aaKnown RBP22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 PSMC2P35998 433 aaKnown RBP22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 CASP4P49662 377 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 PTGISQ16647 500 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 FAM187BQ17R55 369 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 FRMD5Q7Z6J6 570 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 RSPH3Q86UC2 560 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 XXYLT1Q8NBI6 393 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 POMGNT1Q8WZA1 660 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 PDLIM2Q96JY6 352 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 PRIMPOLQ96LW4 560 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 GCOM2Q9BZD3 368 aaPredicted RBP22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 PCIF1Q9H4Z3 704 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 STYXL1Q9Y6J8 313 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 N4BP3O15049 544 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 CDC25BP30305 580 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 PRPF4BQ13523 1007 aaKnown RBP22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 SLFN12LQ6IEE8 588 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 VPS16Q9H269 839 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 METTL14Q9HCE5 456 aaKnown RBP22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 GINS2Q9Y248 185 aa22.36■■□□□ 1.17
VCPKMT-203ENST00000484763 MAN2A1Q16706 1144 aa22.35■■□□□ 1.17
VCPKMT-203ENST00000484763 FAM186BQ8IYM0 893 aa22.35■■□□□ 1.17
VCPKMT-203ENST00000484763 SLC43A3Q8NBI5 491 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms