RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 UBXN11Q5T124 520 aa31.58■■■□□ 2.65
HLA-C-207ENST00000484378 ANKRD54Q6NXT1 300 aa31.58■■■□□ 2.65
HLA-C-207ENST00000484378 MRPL10Q7Z7H8 261 aaKnown RBP31.58■■■□□ 2.65
HLA-C-207ENST00000484378 ZSCAN31Q96LW9 406 aaPredicted RBP31.58■■■□□ 2.65
HLA-C-207ENST00000484378 C2orf71A6NGG8 1288 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 INO80B-WBP1J3KQ70 363 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 CAPSQ13938 189 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 RNF135Q8IUD6 432 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 VPS52Q8N1B4 723 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 FAM184AQ8NB25 1140 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 ASAP3Q8TDY4 903 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 IGSF21Q96ID5 467 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 FOXP1Q9H334 677 aaPredicted RBP31.57■■■□□ 2.64
HLA-C-207ENST00000484378 SH2B1Q9NRF2 756 aaPredicted RBP31.57■■■□□ 2.64
HLA-C-207ENST00000484378 DNAJB4Q9UDY4 337 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 MUTYHQ9UIF7 546 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 TRIOO75962 3097 aa31.57■■■□□ 2.64
HLA-C-207ENST00000484378 TSPAN1O60635 241 aa31.56■■■□□ 2.64
HLA-C-207ENST00000484378 USO1O60763 962 aaKnown RBP31.56■■■□□ 2.64
HLA-C-207ENST00000484378 GALTP07902 379 aa31.56■■■□□ 2.64
HLA-C-207ENST00000484378 NCBP1Q09161 790 aaKnown RBP31.56■■■□□ 2.64
HLA-C-207ENST00000484378 GNL2Q13823 731 aaKnown RBP31.56■■■□□ 2.64
HLA-C-207ENST00000484378 NOTUMQ6P988 496 aa31.56■■■□□ 2.64
HLA-C-207ENST00000484378 PHF7Q9BWX1 381 aaPredicted RBP31.56■■■□□ 2.64
HLA-C-207ENST00000484378 A0A087WWV3 80 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 NCLP19338 710 aaKnown RBP31.55■■■□□ 2.64
HLA-C-207ENST00000484378 AXLP30530 894 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 ARL2P36404 184 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 SLC11A1P49279 550 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 C8orf34Q49A92 452 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 IFNLR1Q8IU57 520 aaPredicted RBP31.55■■■□□ 2.64
HLA-C-207ENST00000484378 CNNM3Q8NE01 707 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 FBXO18Q8NFZ0 1043 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 BCL7CQ8WUZ0 217 aaPredicted RBP31.55■■■□□ 2.64
HLA-C-207ENST00000484378 SUSD6Q92537 303 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 CASP10Q92851 521 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 CCDC51Q96ER9 411 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 KIF2CQ99661 725 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 APOL5Q9BWW9 433 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 ZBP1Q9H171 429 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 POLR3FQ9H1D9 316 aaPredicted RBP31.55■■■□□ 2.64
HLA-C-207ENST00000484378 TUFT1Q9NNX1 390 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 HCFC2Q9Y5Z7 792 aa31.55■■■□□ 2.64
HLA-C-207ENST00000484378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP31.54■■■□□ 2.64
HLA-C-207ENST00000484378 LOC730098B7Z3J9 87 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 CXCL14O95715 111 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 OR52Z1P0C646 297 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 XRCC6P12956 609 aaKnown RBP eCLIP31.54■■■□□ 2.64
HLA-C-207ENST00000484378 HOXB8P17481 243 aaPredicted RBP31.54■■■□□ 2.64
HLA-C-207ENST00000484378 RBM25P49756 843 aaKnown RBP31.54■■■□□ 2.64
HLA-C-207ENST00000484378 MBTD1Q05BQ5 628 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 POU5F1BQ06416 359 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 ORC2Q13416 577 aaPredicted RBP31.54■■■□□ 2.64
HLA-C-207ENST00000484378 ZNF174Q15697 407 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 HERC4Q5GLZ8 1057 aaPredicted RBP31.54■■■□□ 2.64
HLA-C-207ENST00000484378 DDX53Q86TM3 631 aaKnown RBP31.54■■■□□ 2.64
HLA-C-207ENST00000484378 ZNF280BQ86YH2 543 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 TMEM87AQ8NBN3 555 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 CPB2Q96IY4 423 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 FAM193BQ96PV7 902 aaPredicted RBP31.54■■■□□ 2.64
HLA-C-207ENST00000484378 KANSL3Q9P2N6 904 aa31.54■■■□□ 2.64
HLA-C-207ENST00000484378 B4GALT3O60512 393 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 SPATA31C1P0DKV0 1188 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 ITGA4P13612 1032 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 GLRA2P23416 452 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 AFF1P51825 1210 aaKnown RBP31.53■■■□□ 2.64
HLA-C-207ENST00000484378 CBX2Q14781 532 aaPredicted RBP31.53■■■□□ 2.64
HLA-C-207ENST00000484378 SYCE2Q6PIF2 218 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 CATSPER3Q86XQ3 398 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 ERMNQ8TAM6 284 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 AUTS2Q8WXX7 1259 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 RPGRIP1Q96KN7 1286 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 EIF2AQ9BY44 585 aaKnown RBP31.53■■■□□ 2.64
HLA-C-207ENST00000484378 S1PR5Q9H228 398 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 UBN1Q9NPG3 1134 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 IPPQ9Y573 584 aa31.53■■■□□ 2.64
HLA-C-207ENST00000484378 CLASP2O75122 1294 aaKnown RBP31.52■■■□□ 2.64
HLA-C-207ENST00000484378 MED24O75448 989 aa31.52■■■□□ 2.64
HLA-C-207ENST00000484378 POMCP01189 267 aa31.52■■■□□ 2.64
HLA-C-207ENST00000484378 CTSAP10619 480 aa31.52■■■□□ 2.64
HLA-C-207ENST00000484378 TTC38Q5R3I4 469 aa31.52■■■□□ 2.64
HLA-C-207ENST00000484378 NOSTRINQ8IVI9 506 aa31.52■■■□□ 2.64
HLA-C-207ENST00000484378 SMG8Q8ND04 991 aaKnown RBP31.52■■■□□ 2.64
HLA-C-207ENST00000484378 NFKBIZQ9BYH8 718 aa31.52■■■□□ 2.64
HLA-C-207ENST00000484378 DDHD2O94830 711 aa31.51■■■□□ 2.63
HLA-C-207ENST00000484378 TPRNQ4KMQ1 711 aa31.51■■■□□ 2.63
HLA-C-207ENST00000484378 MAEAQ7L5Y9 396 aa31.51■■■□□ 2.63
HLA-C-207ENST00000484378 POLR3CQ9BUI4 534 aaPredicted RBP31.51■■■□□ 2.63
HLA-C-207ENST00000484378 TRIM6Q9C030 488 aaPredicted RBP31.51■■■□□ 2.63
HLA-C-207ENST00000484378 CSRNP2Q9H175 543 aa31.51■■■□□ 2.63
HLA-C-207ENST00000484378 PLA2G5P39877 138 aa31.5■■■□□ 2.63
HLA-C-207ENST00000484378 GIT2Q14161 759 aa31.5■■■□□ 2.63
HLA-C-207ENST00000484378 AMHR2Q16671 573 aa31.5■■■□□ 2.63
HLA-C-207ENST00000484378 POTEGQ6S5H5 508 aa31.5■■■□□ 2.63
HLA-C-207ENST00000484378 MCPH1Q8NEM0 835 aa31.5■■■□□ 2.63
HLA-C-207ENST00000484378 FAM122AQ96E09 287 aa31.5■■■□□ 2.63
HLA-C-207ENST00000484378 NACC1Q96RE7 527 aa31.5■■■□□ 2.63
HLA-C-207ENST00000484378 TMEM175Q9BSA9 504 aa31.5■■■□□ 2.63
HLA-C-207ENST00000484378 GPRC5CQ9NQ84 441 aa31.5■■■□□ 2.63
HLA-C-207ENST00000484378 DBR1Q9UK59 544 aaKnown RBP31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms