RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 NOTUMQ6P988 496 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 GLB1LQ6UWU2 654 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 EP400NLQ6ZTU2 488 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 KCNK18Q7Z418 384 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 BRAPQ7Z569 592 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 PGBD4Q96DM1 585 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 NECAB3Q96P71 396 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-209ENST00000484305 MRPL9Q9BYD2 267 aaKnown RBP14.29□□□□□ -0.12
HDAC1-209ENST00000484305 IGFLR1Q9H665 355 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 TBC1D13Q9NVG8 400 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 CLDND1Q9NY35 253 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 INPP5FQ9Y2H2 1132 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 IPPQ9Y573 584 aa14.29□□□□□ -0.12
HDAC1-209ENST00000484305 NT5C1B-RDH14C9J2C7 533 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 H3BQ06 376 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 K7ELQ4 463 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 LINC01565O15544 149 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 EYA4O95677 639 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 NCLP19338 710 aaKnown RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 PDCP20941 246 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 LTBRP36941 435 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 BCAR1P56945 870 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 PLCB3Q01970 1234 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 NCBP1Q09161 790 aaKnown RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 CTC1Q2NKJ3 1217 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 LEXMQ3ZCV2 418 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 ARL6IP4Q66PJ3 421 aaKnown RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 CDCA2Q69YH5 1023 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 CDR2LQ86X02 465 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 SLC39A11Q8N1S5 342 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 MICAL1Q8TDZ2 1067 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 MRPS27Q92552 414 aaKnown RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 UHRF1Q96T88 793 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-209ENST00000484305 CSRNP2Q9H175 543 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 RSAD1Q9HA92 442 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 TLR9Q9NR96 1032 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 SPG21Q9NZD8 308 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 DNM3Q9UQ16 869 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 HES2Q9Y543 173 aa14.28□□□□□ -0.12
HDAC1-209ENST00000484305 MYH11P35749 1972 aa14.27□□□□□ -0.12
HDAC1-209ENST00000484305 TDRD15B5MCY1 1934 aaKnown RBP14.27□□□□□ -0.12
HDAC1-209ENST00000484305 CNTNAP2Q9UHC6 1331 aa14.27□□□□□ -0.12
HDAC1-209ENST00000484305 A0A1B0GUA9 196 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 TTLL13PA6NNM8 815 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 FSCN2O14926 492 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 NCK2O43639 380 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 B4GALT3O60512 393 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 ZC3H11AO75152 810 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDAC1-209ENST00000484305 ITGA4P13612 1032 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 SYT1P21579 422 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 PPM1AP35813 382 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 NRIP1P48552 1158 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 ALDH7A1P49419 539 aaKnown RBP14.27□□□□□ -0.13
HDAC1-209ENST00000484305 RNASELQ05823 741 aaKnown RBP14.27□□□□□ -0.13
HDAC1-209ENST00000484305 DLX2Q07687 328 aaPredicted RBP14.27□□□□□ -0.13
HDAC1-209ENST00000484305 ADAM15Q13444 863 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 ZRSR1Q15695 479 aaKnown RBP14.27□□□□□ -0.13
HDAC1-209ENST00000484305 RBM23Q86U06 439 aaKnown RBP14.27□□□□□ -0.13
HDAC1-209ENST00000484305 ZNF280BQ86YH2 543 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 RSPH1Q8WYR4 309 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 CCDC51Q96ER9 411 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 INTS4Q96HW7 963 aaKnown RBP14.27□□□□□ -0.13
HDAC1-209ENST00000484305 PNMA5Q96PV4 448 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 PLIN2Q99541 437 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 GBP3Q9H0R5 595 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 FZD8Q9H461 694 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 NRDE2Q9H7Z3 1164 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 DNAJB4Q9UDY4 337 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 LZTS1Q9Y250 596 aa14.27□□□□□ -0.13
HDAC1-209ENST00000484305 DDHD2O94830 711 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 NAMPTP43490 491 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 KRT17Q04695 432 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 PPP2R5AQ15172 486 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 SF3A1Q15459 793 aaKnown RBP14.26□□□□□ -0.13
HDAC1-209ENST00000484305 FAM187BQ17R55 369 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 HYIQ5T013 277 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 RINT1Q6NUQ1 792 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 SLC27A1Q6PCB7 646 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 TMEM173Q86WV6 379 aaPredicted RBP14.26□□□□□ -0.13
HDAC1-209ENST00000484305 ZBTB8OSQ8IWT0 167 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 CNNM3Q8NE01 707 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 URGCPQ8TCY9 931 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 KIFAP3Q92845 792 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 PPP2R3CQ969Q6 453 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 PRIMPOLQ96LW4 560 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 KIFC3Q9BVG8 833 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 RUSC1Q9BVN2 902 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 APOL6Q9BWW8 343 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 CCDC113Q9H0I3 377 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 C2orf40Q9H1Z8 148 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 NXF3Q9H4D5 531 aaKnown RBP14.26□□□□□ -0.13
HDAC1-209ENST00000484305 PRMT7Q9NVM4 692 aaPredicted RBP14.26□□□□□ -0.13
HDAC1-209ENST00000484305 PUF60Q9UHX1 559 aaKnown RBP14.26□□□□□ -0.13
HDAC1-209ENST00000484305 USP20Q9Y2K6 914 aa14.26□□□□□ -0.13
HDAC1-209ENST00000484305 MUC3AQ02505 3323 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 ARL5CA6NH57 179 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 TNFRSF10AO00220 468 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 PER2O15055 1255 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms