RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 NIFKQ9BYG3 293 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 DEF6Q9H4E7 631 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 C17orf75Q9HAS0 396 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 LRRC37A2A6NM11 1700 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 SSU72P8A0A1W2PR75 194 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZBTB42B2RXF5 422 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 SERPING1P05155 500 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 EDN1P05305 212 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ADORA2AP29274 412 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 VAMP7P51809 220 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 VAV2P52735 878 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 JAM2P57087 298 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 RTP1P59025 263 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 PPP2R5AQ15172 486 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 SLC9C1Q4G0N8 1177 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 PHLDB3Q6NSJ2 640 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZNF662Q6ZS27 426 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 MORC4Q8TE76 937 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 GPR88Q9GZN0 384 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 HDAC6Q9UBN7 1215 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 EMSYQ7Z589 1322 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ARID2Q68CP9 1835 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 TBC1D8O95759 1140 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZBTB48P10074 688 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ARL2P36404 184 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 KLHL30Q0D2K2 578 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 MKRN4PQ13434 485 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 SPA17Q15506 151 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ELF2Q15723 593 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 SNRNP35Q16560 246 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 INTS8Q75QN2 995 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ARMCX2Q7L311 632 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZNF571Q7Z3V5 609 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 RASAL3Q86YV0 1011 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 AFAP1L1Q8TED9 768 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ANKRD7Q92527 254 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ELMO3Q96BJ8 720 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 CCDC127Q96BQ5 260 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ERO1AQ96HE7 468 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 SPAG5Q96R06 1193 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 HAPLN2Q9GZV7 340 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 EPC1Q9H2F5 836 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 WBP1LQ9NX94 342 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 FBXL5Q9UKA1 691 aa9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZNFX1Q9P2E3 1918 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-204ENST00000483763 TTLL13PA6NNM8 815 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 RBAK-RBAKDNI3L0D1 243 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 HNRNPDLO14979 420 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 IPO7O95373 1038 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 TXNP10599 105 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 COPB2P35606 906 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 AMPD2Q01433 879 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZNF792Q3KQV3 632 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 SHCBP1Q8NEM2 672 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 OLIG1Q8TAK6 271 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 SLC7A3Q8WY07 619 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 GLG1Q92896 1179 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 SPATA33Q96N06 139 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 PACSIN1Q9BY11 444 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 TMEM117Q9H0C3 514 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 NUCKS1Q9H1E3 243 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 PRDM10Q9NQV6 1147 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 CAPN6Q9Y6Q1 641 aa9.62□□□□□ -0.87
CDC42SE1-204ENST00000483763 CTAGE9A4FU28 777 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 KRT86O43790 486 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 CAPN15O75808 1086 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 ATP1A1P05023 1023 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 MAGEA1P43355 309 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 WNT7BP56706 349 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 MYL7Q01449 175 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 KIF5AQ12840 1032 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 SLC18A3Q16572 532 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 BRDTQ58F21 947 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 TAPT1Q6NXT6 567 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 MAMDC4Q6UXC1 1216 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 ANKRD23Q86SG2 305 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 SLC17A8Q8NDX2 589 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 TRAPPC12Q8WVT3 735 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 POMGNT1Q8WZA1 660 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZBTB45Q96K62 511 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 FBXL18Q96ME1 805 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 INTS2Q9H0H0 1204 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 TOPORSQ9NS56 1045 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 MYO1AQ9UBC5 1043 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 FAM170AA1A519 330 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 F8VZ95 297 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 NOP56O00567 594 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 SRGAP2O75044 1071 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 GFPT2O94808 682 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 GJB1P08034 283 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 KRT13P13646 458 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 DRAP1Q14919 205 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 ASIC2Q16515 512 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 LRRC71Q8N4P6 559 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 PARD3BQ8TEW8 1205 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 PRPF31Q8WWY3 499 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 KAT5Q92993 513 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 IFT74Q96LB3 600 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms