RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 C8orf34Q49A92 452 aa22.08■■□□□ 1.13
HPS4-213ENST00000483631 UBXN11Q5T124 520 aa22.08■■□□□ 1.13
HPS4-213ENST00000483631 AGMOQ6ZNB7 445 aa22.08■■□□□ 1.13
HPS4-213ENST00000483631 SUSD6Q92537 303 aa22.08■■□□□ 1.13
HPS4-213ENST00000483631 KIF2CQ99661 725 aa22.08■■□□□ 1.13
HPS4-213ENST00000483631 TMEM60Q9H2L4 133 aa22.08■■□□□ 1.13
HPS4-213ENST00000483631 NRDE2Q9H7Z3 1164 aa22.08■■□□□ 1.13
HPS4-213ENST00000483631 RSAD1Q9HA92 442 aa22.08■■□□□ 1.13
HPS4-213ENST00000483631 BMP2KQ9NSY1 1161 aaPredicted RBP22.08■■□□□ 1.13
HPS4-213ENST00000483631 USP15Q9Y4E8 981 aaPredicted RBP22.08■■□□□ 1.13
HPS4-213ENST00000483631 POTEMA6NI47 508 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 HIDE1A8MVS5 230 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 INPPL1O15357 1258 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 GALTP07902 379 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 SPATA31C1P0DKV0 1188 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 MUTP22033 750 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 RNASELQ05823 741 aaKnown RBP22.07■■□□□ 1.12
HPS4-213ENST00000483631 CBX2Q14781 532 aaPredicted RBP22.07■■□□□ 1.12
HPS4-213ENST00000483631 HERC4Q5GLZ8 1057 aaPredicted RBP22.07■■□□□ 1.12
HPS4-213ENST00000483631 ANKRD54Q6NXT1 300 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 NOTUMQ6P988 496 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 DDX53Q86TM3 631 aaKnown RBP22.07■■□□□ 1.12
HPS4-213ENST00000483631 ERMNQ8TAM6 284 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 CASP10Q92851 521 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 IGSF21Q96ID5 467 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 TMEM175Q9BSA9 504 aa22.07■■□□□ 1.12
HPS4-213ENST00000483631 POLR3CQ9BUI4 534 aaPredicted RBP22.07■■□□□ 1.12
HPS4-213ENST00000483631 PHF7Q9BWX1 381 aaPredicted RBP22.07■■□□□ 1.12
HPS4-213ENST00000483631 DAXXQ9UER7 740 aaPredicted RBP22.07■■□□□ 1.12
HPS4-213ENST00000483631 DBR1Q9UK59 544 aaKnown RBP22.07■■□□□ 1.12
HPS4-213ENST00000483631 C2orf71A6NGG8 1288 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 MEIS3P2A8K0S8 358 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 LOC730098B7Z3J9 87 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 TSPAN1O60635 241 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 OR52Z1P0C646 297 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 GUCY1B3Q02153 619 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 FAM184AQ8NB25 1140 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 MCPH1Q8NEM0 835 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 NACC1Q96RE7 527 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 ZBP1Q9H171 429 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 INPP5FQ9Y2H2 1132 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 HCN4Q9Y3Q4 1203 aa22.06■■□□□ 1.12
HPS4-213ENST00000483631 C5orf42Q9H799 3197 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 ZMYM2Q9UBW7 1377 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 CTSAP10619 480 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 RPA1P27694 616 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 CAPSQ13938 189 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 CATSPER3Q86XQ3 398 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 NOSTRINQ8IVI9 506 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 VPS52Q8N1B4 723 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 ASAP3Q8TDY4 903 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 PIGOQ8TEQ8 1089 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 CSRNP2Q9H175 543 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 S1PR5Q9H228 398 aa22.05■■□□□ 1.12
HPS4-213ENST00000483631 NT5C1B-RDH14C9J2C7 533 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 INO80B-WBP1J3KQ70 363 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 ATP2B1P20020 1258 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 GLRA2P23416 452 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 TECP42680 631 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 MBTD1Q05BQ5 628 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 AMHR2Q16671 573 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 TPRNQ4KMQ1 711 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 RNF135Q8IUD6 432 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 NOL7Q9UMY1 257 aaKnown RBP22.04■■□□□ 1.12
HPS4-213ENST00000483631 HCFC2Q9Y5Z7 792 aa22.04■■□□□ 1.12
HPS4-213ENST00000483631 TDRD15B5MCY1 1934 aaKnown RBP22.04■■□□□ 1.12
HPS4-213ENST00000483631 ITGA4P13612 1032 aa22.03■■□□□ 1.12
HPS4-213ENST00000483631 RBM10P98175 930 aaKnown RBP22.03■■□□□ 1.12
HPS4-213ENST00000483631 GNL2Q13823 731 aaKnown RBP22.03■■□□□ 1.12
HPS4-213ENST00000483631 LONRF3Q496Y0 759 aa22.03■■□□□ 1.12
HPS4-213ENST00000483631 TTC38Q5R3I4 469 aa22.03■■□□□ 1.12
HPS4-213ENST00000483631 HAUS3Q68CZ6 603 aa22.03■■□□□ 1.12
HPS4-213ENST00000483631 SYCE2Q6PIF2 218 aa22.03■■□□□ 1.12
HPS4-213ENST00000483631 TMEM173Q86WV6 379 aaPredicted RBP22.03■■□□□ 1.12
HPS4-213ENST00000483631 HACE1Q8IYU2 909 aa22.03■■□□□ 1.12
HPS4-213ENST00000483631 SMG8Q8ND04 991 aaKnown RBP22.03■■□□□ 1.12
HPS4-213ENST00000483631 PRIMPOLQ96LW4 560 aa22.03■■□□□ 1.12
HPS4-213ENST00000483631 FAM193BQ96PV7 902 aaPredicted RBP22.03■■□□□ 1.12
HPS4-213ENST00000483631 POLR3FQ9H1D9 316 aaPredicted RBP22.03■■□□□ 1.12
HPS4-213ENST00000483631 IPPQ9Y573 584 aa22.03■■□□□ 1.12
HPS4-213ENST00000483631 STK24Q9Y6E0 443 aa22.03■■□□□ 1.12
HPS4-213ENST00000483631 FAM86C2PA6NEL3 165 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 CLASP2O75122 1294 aaKnown RBP22.02■■□□□ 1.12
HPS4-213ENST00000483631 MED24O75448 989 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 CXCL14O95715 111 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 ALDH2P05091 517 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 U2AF2P26368 475 aaKnown RBP eCLIP22.02■■□□□ 1.12
HPS4-213ENST00000483631 SLC11A1P49279 550 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 ITIH3Q06033 890 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 RABEP1Q15276 862 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 ZNF174Q15697 407 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 PPP4R3CPQ6ZMV5 832 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 ZNF280BQ86YH2 543 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 DZANK1Q9NVP4 752 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 DNAJB4Q9UDY4 337 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 GIT1Q9Y2X7 761 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 KIF3AQ9Y496 699 aa22.02■■□□□ 1.12
HPS4-213ENST00000483631 USO1O60763 962 aaKnown RBP22.01■■□□□ 1.11
HPS4-213ENST00000483631 DDHD2O94830 711 aa22.01■■□□□ 1.11
HPS4-213ENST00000483631 ARF4P18085 180 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms