RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 LMAN2LQ9H0V9 348 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 CLDND1Q9NY35 253 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 MARK1Q9P0L2 795 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 PRKAG3Q9UGI9 489 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 SALL4Q9UJQ4 1053 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 E7EWF7 191 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 C5orf67F2Z3F1 127 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 DDAH1O94760 285 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 USP17L7P0C7H9 530 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 RARAP10276 462 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 GHRP10912 638 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 EDN3P14138 238 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 SMARCA1P28370 1054 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 SOX18P35713 384 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 TCF7P36402 384 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-207ENST00000483407 BMPR1AP36894 532 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 ADAM17P78536 824 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 PPFIA1Q13136 1202 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 BTG3Q14201 252 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-207ENST00000483407 TTC22Q5TAA0 569 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 PEAR1Q5VY43 1037 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-207ENST00000483407 USP17L6PQ6QN14 398 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 CASC1Q6TDU7 716 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 KRT25Q7Z3Z0 450 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 ADHFE1Q8IWW8 467 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 TMTC2Q8N394 836 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 GLIS3Q8NEA6 775 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
CSDE1-207ENST00000483407 SEPT1Q8WYJ6 367 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 GLG1Q92896 1179 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 PPP2R3CQ969Q6 453 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 GPRASP2Q96D09 838 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 MAP3K14Q99558 947 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 POP1Q99575 1024 aaKnown RBP6.72□□□□□ -1.33
CSDE1-207ENST00000483407 SPZ1Q9BXG8 430 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 IL25Q9H293 177 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 SMARCAD1Q9H4L7 1026 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 BCAS3Q9H6U6 928 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 EHMT1Q9H9B1 1298 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 CUEDC1Q9NWM3 386 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-207ENST00000483407 ERAP1Q9NZ08 941 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 TUBE1Q9UJT0 475 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 ADGRA3Q8IWK6 1321 aa6.72□□□□□ -1.33
CSDE1-207ENST00000483407 A0A1W2PP55 124 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 SPDYE3A6NKU9 549 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 M0QZ92 97 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 MEIS2O14770 477 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 MAFGO15525 162 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 GADD45BO75293 160 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-207ENST00000483407 KIF4AO95239 1232 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 MAP3K6O95382 1288 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 CHRNA1P02708 482 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 GSPT1P15170 499 aaKnown RBP6.71□□□□□ -1.34
CSDE1-207ENST00000483407 CHMLP26374 656 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 MARK3P27448 753 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 PTH1RQ03431 593 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 ZP2Q05996 745 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 SPEM2Q0P670 501 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 MTMR1Q13613 665 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 LPIN1Q14693 890 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 GRIK4Q16099 956 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 NFXL1Q6ZNB6 911 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 TSHZ1Q6ZSZ6 1077 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 ZNF654Q8IZM8 581 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 EXOC6Q8TAG9 804 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 IGDCC4Q8TDY8 1250 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 ZNF837Q96EG3 531 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-207ENST00000483407 DRC1Q96MC2 740 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 PNMA5Q96PV4 448 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 MTA3Q9BTC8 594 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 PLVAPQ9BX97 442 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 FTHL17Q9BXU8 183 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 KCNH6Q9H252 994 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 PSTPIP2Q9H939 334 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 ATXN7L1Q9ULK2 861 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-207ENST00000483407 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-207ENST00000483407 CDY2AQ9Y6F7 541 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 TRIP12Q14669 1992 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-207ENST00000483407 COL4A4P53420 1690 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-207ENST00000483407 COL4A6Q14031 1691 aa6.71□□□□□ -1.34
CSDE1-207ENST00000483407 TRANK1O15050 2925 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 REV3LO60673 3130 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 MBLAC1A4D2B0 266 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-207ENST00000483407 CCDC69A6NI79 296 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 RRN3P2A6NIE6 340 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 ENPP3O14638 875 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 GRM6O15303 877 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 ATP9AO75110 1047 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 DGKIO75912 1065 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 MMP1P03956 469 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 PSAPP07602 524 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 STAG3L1P0CL83 205 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 CALM1P0DP23 149 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 CALM2P0DP24 149 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 CALM3P0DP25 149 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 KCNA2P16389 499 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 ITGB5P18084 799 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 NFKB1P19838 968 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-207ENST00000483407 GSTT1P30711 240 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms