RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 NR3C1P04150 777 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 PBX1P40424 430 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 EMC2Q15006 297 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 PLCB4Q15147 1175 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 WHAMMP3Q1A5X7 153 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 MIIPQ5JXC2 388 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 HAUS6Q7Z4H7 955 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 AFG1LQ8WV93 481 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 NRBP2Q9NSY0 501 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 TYW1Q9NV66 732 aaKnown RBP11.33□□□□□ -0.6
APTX-225ENST00000482687 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
APTX-225ENST00000482687 RBM47A0AV96 593 aaKnown RBP11.32□□□□□ -0.6
APTX-225ENST00000482687 A6NNZ2 444 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
APTX-225ENST00000482687 PDXKO00764 312 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 CETN3O15182 167 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 CA12O43570 354 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 LGR5O75473 907 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 DGAT1O75907 488 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 SYF2O95926 243 aaKnown RBP11.32□□□□□ -0.6
APTX-225ENST00000482687 ZNF286BP0CG31 522 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 NPTX2P47972 431 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 CASP4P49662 377 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 CYP2J2P51589 502 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 HTRA3P83110 453 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 RBL2Q08999 1139 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 DEFB115Q30KQ5 88 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 TUBB8Q3ZCM7 444 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 VWA3BQ502W6 1294 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 FMNL3Q8IVF7 1028 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 CCDC155Q8N6L0 562 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 ASAP3Q8TDY4 903 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 PPP1R13LQ8WUF5 828 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 FAXDC2Q96IV6 333 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 CAPNS2Q96L46 248 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 PCMTD1Q96MG8 357 aaPredicted RBP11.32□□□□□ -0.6
APTX-225ENST00000482687 STRA6Q9BX79 667 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 NIFKQ9BYG3 293 aaKnown RBP11.32□□□□□ -0.6
APTX-225ENST00000482687 PCIF1Q9H4Z3 704 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 KMT5AQ9NQR1 393 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 SLC5A4Q9NY91 659 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 TRPC6Q9Y210 931 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 TRAF3IP3Q9Y228 551 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 RNF225M0QZC1 329 aaPredicted RBP11.32□□□□□ -0.6
APTX-225ENST00000482687 PPP1R37O75864 691 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 NCKAP1LP55160 1127 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 VSNL1P62760 191 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 DRP2Q13474 957 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 CRYMQ14894 314 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 PPP2R5AQ15172 486 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 EDRF1Q3B7T1 1238 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 FBXW10Q5XX13 1052 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 STXBP4Q6ZWJ1 553 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 OR6J1Q8NGC5 347 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 SGSM3Q96HU1 749 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 CEP63Q96MT8 703 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 TIPINQ9BVW5 301 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 RNPEPQ9H4A4 650 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 GJD2Q9UKL4 321 aa11.32□□□□□ -0.6
APTX-225ENST00000482687 ADGRA3Q8IWK6 1321 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 KLHL33A6NCF5 533 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
APTX-225ENST00000482687 AKAP3O75969 853 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 CCDC175P0C221 793 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 RDXP35241 583 aaKnown RBP11.31□□□□□ -0.6
APTX-225ENST00000482687 PSMC4P43686 418 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 FNTAP49354 379 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 IGBP1P78318 339 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 CAP1Q01518 475 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 TBC1D8BQ0IIM8 1120 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 DMP1Q13316 513 aaPredicted RBP11.31□□□□□ -0.6
APTX-225ENST00000482687 TARBP2Q15633 366 aaKnown RBP11.31□□□□□ -0.6
APTX-225ENST00000482687 MAN2A1Q16706 1144 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 WLSQ5T9L3 541 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 PPFIBP1Q86W92 1011 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 ZC3H3Q8IXZ2 948 aaKnown RBP11.31□□□□□ -0.6
APTX-225ENST00000482687 ZSWIM2Q8NEG5 633 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 MCPH1Q8NEM0 835 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 USP6NLQ92738 828 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 KIFAP3Q92845 792 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 HHIPL1Q96JK4 782 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 ZNF668Q96K58 619 aaPredicted RBP11.31□□□□□ -0.6
APTX-225ENST00000482687 ACCSQ96QU6 501 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 ABHD16BQ9H3Z7 469 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 SUGCTQ9HAC7 445 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 AGPAT3Q9NRZ7 376 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 GABRQQ9UN88 632 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 EVPLQ92817 2033 aa11.31□□□□□ -0.6
APTX-225ENST00000482687 DENND3A2RUS2 1198 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 ZBTB42B2RXF5 422 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 DYNC1LI2O43237 492 aaPredicted RBP11.3□□□□□ -0.6
APTX-225ENST00000482687 LGALS2P05162 132 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 GLRA2P23416 452 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 CASP14P31944 242 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 RGS2P41220 211 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 DNM2P50570 870 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms