RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 GGA3Q9NZ52 723 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 ANAPC4Q9UJX5 808 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 SCINQ9Y6U3 715 aa7.9□□□□□ -1.14
CLK1-212ENST00000482590 MED23Q9ULK4 1368 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 A0A1B0GTL3 188 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 ZNF500O60304 480 aaPredicted RBP7.89□□□□□ -1.15
CLK1-212ENST00000482590 ALDH1L1O75891 902 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 FOSP01100 380 aaPredicted RBP7.89□□□□□ -1.15
CLK1-212ENST00000482590 ZNF445P59923 1031 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 FOXO4P98177 505 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 SQSTM1Q13501 440 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 MYBPC2Q14324 1141 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 SPATS1Q496A3 300 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 DCAF15Q66K64 600 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 BICRALQ6AI39 1079 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 ZNF280DQ6N043 979 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 RGMBQ6NW40 437 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 CYP2R1Q6VVX0 501 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 LSRQ86X29 649 aaPredicted RBP7.89□□□□□ -1.15
CLK1-212ENST00000482590 FNIP1Q8TF40 1166 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 PDLIM7Q9NR12 457 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 SUSD2Q9UGT4 822 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 NRBP1Q9UHY1 535 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 MAP3K2Q9Y2U5 619 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 MRVI1Q9Y6F6 885 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 OTOFQ9HC10 1997 aa7.89□□□□□ -1.15
CLK1-212ENST00000482590 COL6A1P12109 1028 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 PMLP29590 882 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 PRR5P85299 388 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 TTF1Q15361 905 aaPredicted RBP7.88□□□□□ -1.15
CLK1-212ENST00000482590 MAPRE1Q15691 268 aaKnown RBP7.88□□□□□ -1.15
CLK1-212ENST00000482590 TKFCQ3LXA3 575 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 ANKRD39Q53RE8 183 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 AXDND1Q5T1B0 1012 aaPredicted RBP7.88□□□□□ -1.15
CLK1-212ENST00000482590 PPP4R4Q6NUP7 873 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 LIPIQ6XZB0 460 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 C8orf58Q8NAV2 365 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 AGBL3Q8NEM8 1001 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 BRF1Q92994 677 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 SPON2Q9BUD6 331 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 GP6Q9HCN6 339 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 PRKAG3Q9UGI9 489 aa7.88□□□□□ -1.15
CLK1-212ENST00000482590 MYO3BQ8WXR4 1341 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 A0A1W2PQJ5 194 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 PI4KAP2A4QPH2 592 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 ALG1L2C9J202 215 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 POU3F3P20264 500 aaPredicted RBP7.87□□□□□ -1.15
CLK1-212ENST00000482590 IGHMBP2P38935 993 aaKnown RBP7.87□□□□□ -1.15
CLK1-212ENST00000482590 NOL9Q5SY16 702 aaKnown RBP7.87□□□□□ -1.15
CLK1-212ENST00000482590 DLK2Q6UY11 383 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 KSR2Q6VAB6 950 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 KIAA0825Q8IV33 1275 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 PI4KAP1Q8N8J0 262 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 CDCA5Q96FF9 252 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 BORCS6Q96GS4 357 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 FCRL3Q96P31 734 aaPredicted RBP7.87□□□□□ -1.15
CLK1-212ENST00000482590 MYOZ2Q9NPC6 264 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 SAGE1Q9NXZ1 904 aa7.87□□□□□ -1.15
CLK1-212ENST00000482590 F8W031 263 aaPredicted RBP7.86□□□□□ -1.15
CLK1-212ENST00000482590 TACR1P25103 407 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 SOX9P48436 509 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 KIF23Q02241 960 aaPredicted RBP7.86□□□□□ -1.15
CLK1-212ENST00000482590 IFRD2Q12894 506 aaPredicted RBP7.86□□□□□ -1.15
CLK1-212ENST00000482590 RAPGEF1Q13905 1077 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 TWISTNBQ3B726 338 aaPredicted RBP7.86□□□□□ -1.15
CLK1-212ENST00000482590 FIBCD1Q8N539 461 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 TAB3Q8N5C8 712 aaPredicted RBP7.86□□□□□ -1.15
CLK1-212ENST00000482590 PTCHD1Q96NR3 888 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 SPATA25Q9BR10 227 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 PAGR1Q9BTK6 254 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 KRTAP17-1Q9BYP8 105 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 EFR3BQ9Y2G0 817 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 R3HCC1Q9Y3T6 440 aaKnown RBP7.86□□□□□ -1.15
CLK1-212ENST00000482590 FHOD1Q9Y613 1164 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 PMF1-BGLAPU3KQ54 211 aa7.86□□□□□ -1.15
CLK1-212ENST00000482590 ASTN2O75129 1339 aaPredicted RBP7.85□□□□□ -1.15
CLK1-212ENST00000482590 TNRC18O15417 2968 aaPredicted RBP7.85□□□□□ -1.15
CLK1-212ENST00000482590 IGKV5-2P06315 115 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 IFNGR1P15260 489 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 CD247P20963 164 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 NF2P35240 595 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 MC3RP41968 323 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 NOP2P46087 812 aaKnown RBP7.85□□□□□ -1.15
CLK1-212ENST00000482590 CCT4P50991 539 aaKnown RBP7.85□□□□□ -1.15
CLK1-212ENST00000482590 CORO7P57737 925 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 ZNF280AP59817 542 aaPredicted RBP7.85□□□□□ -1.15
CLK1-212ENST00000482590 FKBP1BP68106 108 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 DLX2Q07687 328 aaPredicted RBP7.85□□□□□ -1.15
CLK1-212ENST00000482590 ZYXQ15942 572 aaKnown RBP7.85□□□□□ -1.15
CLK1-212ENST00000482590 NT5DC1Q5TFE4 455 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 UBE3BQ7Z3V4 1068 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 TSPYL6Q8N831 410 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 TTLL11Q8NHH1 800 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 MPHOSPH8Q99549 860 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 INO80BQ9C086 356 aaPredicted RBP7.85□□□□□ -1.15
CLK1-212ENST00000482590 RNF38Q9H0F5 515 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 GREM2Q9H772 168 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 GINM1Q9NU53 330 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 ZNF451Q9Y4E5 1061 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 COL1A1P02452 1464 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms