RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CCDC85BQ15834 202 aaPredicted RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 TPD52L1Q16890 204 aaPredicted RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 MSMPQ1L6U9 139 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 GRAMD1BQ3KR37 738 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 FILIP1LQ4L180 1135 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 ASPRV1Q53RT3 343 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 ZNF772Q68DY9 489 aaPredicted RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 WWC2Q6AWC2 1192 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 HHIPL2Q6UWX4 724 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 ADAMTSL4Q6UY14 1074 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 FAM43BQ6ZT52 329 aaPredicted RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 PDILTQ8N807 584 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 ANKRD20A12PQ8NF67 263 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 CACTINQ8WUQ7 758 aaKnown RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 CCDC47Q96A33 483 aaKnown RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 RRP36Q96EU6 259 aaKnown RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 ASIC4Q96FT7 647 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 XPO4Q9C0E2 1151 aaKnown RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 IL17RBQ9NRM6 502 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 IFNKQ9P0W0 207 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 MAD2L2Q9UI95 211 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 MAN1B1Q9UKM7 699 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 PYCARDQ9ULZ3 195 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 LZTS1Q9Y250 596 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 FLT1P17948 1338 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 CCDC163A0A0D9SF12 145 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 ZSCAN12O43309 604 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 HLA-DOAP06340 250 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 CYP2D6P10635 497 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 FOSL1P15407 271 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 HSPA1LP34931 641 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 RAB27AP51159 221 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 PTPN14Q15678 1187 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 NPY5RQ15761 445 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 TXNRD1Q16881 649 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 CFAP100Q494V2 611 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 INO80DQ53TQ3 878 aaPredicted RBP8.59□□□□□ -1.03
SNX13-208ENST00000482558 SPATA1Q5VX52 437 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 MCTP2Q6DN12 878 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 FDX2Q6P4F2 183 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 AMIGO3Q86WK7 504 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 VSTM4Q8IW00 320 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 NIM1KQ8IY84 436 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 NINJ1Q92982 152 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 PAGE5Q96GU1 130 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 MASTLQ96GX5 879 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 CCDC17Q96LX7 622 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 MFSD14AQ96MC6 490 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 FBXL18Q96ME1 805 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 TMEM47Q9BQJ4 181 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 CEP44Q9C0F1 390 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 ZMYND12Q9H0C1 365 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 PDCL3Q9H2J4 239 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 ZIM2Q9NZV7 527 aa8.59□□□□□ -1.03
SNX13-208ENST00000482558 GPN3Q9UHW5 284 aaPredicted RBP8.59□□□□□ -1.03
SNX13-208ENST00000482558 MEGF11A6BM72 1044 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 GOLGA6CA6NDK9 693 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 GOLGA6BA6NDN3 693 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 KLRF2D3W0D1 207 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 SLC26A4O43511 780 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 GOLGA6DP0CG33 693 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 SRGNP10124 158 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 TNNT1P13805 278 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 ZNF18P17022 549 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 COPB2P35606 906 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 GUCY2FP51841 1108 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 STIM1Q13586 685 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 ZNF174Q15697 407 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 CCDC174Q6PII3 467 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 PIK3AP1Q6ZUJ8 805 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 TMC6Q7Z403 805 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 MAPKAPK5Q8IW41 473 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 KIF18AQ8NI77 898 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 E2F7Q96AV8 911 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 NAA15Q9BXJ9 866 aaKnown RBP8.58□□□□□ -1.04
SNX13-208ENST00000482558 RAB34Q9BZG1 259 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 CCSER1Q9C0I3 900 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 LRRC27Q9C0I9 530 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 DHX36Q9H2U1 1008 aaKnown RBP8.58□□□□□ -1.04
SNX13-208ENST00000482558 CLEC4MQ9H2X3 399 aaPredicted RBP8.58□□□□□ -1.04
SNX13-208ENST00000482558 KCNQ5Q9NR82 932 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 GOLGA6AQ9NYA3 693 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 POLLQ9UGP5 575 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 STX8Q9UNK0 236 aa8.58□□□□□ -1.04
SNX13-208ENST00000482558 NRXN2Q9P2S2 1712 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 VWA3AA6NCI4 1184 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 UBE2Q2LH0YL09 131 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 ARHGAP6O43182 974 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 STX10O60499 249 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 NMT2O60551 498 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 TPM1P09493 284 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 JUNBP17275 347 aaPredicted RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 ITGB5P18084 799 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 MAP4P27816 1152 aaKnown RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 UBA7P41226 1012 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 NEK2P51955 445 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 CCZ1BP86790 482 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 CCZ1P86791 482 aaPredicted RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 POU5F1Q01860 360 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms