RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 COL19A1Q14993 1142 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 ZRSR1Q15695 479 aaKnown RBP17.39■□□□□ 0.37
COL16A1-212ENST00000482478 KRT79Q5XKE5 535 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 HACE1Q8IYU2 909 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 SLC39A11Q8N1S5 342 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 BHMT2Q9H2M3 363 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 TLE6Q9H808 572 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 DDX19AQ9NUU7 478 aaKnown RBP17.39■□□□□ 0.37
COL16A1-212ENST00000482478 BARX2Q9UMQ3 279 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-212ENST00000482478 LZTS1Q9Y250 596 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 STK24Q9Y6E0 443 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 FSD2A1L4K1 749 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 NT5C1B-RDH14C9J2C7 533 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 XRCC6P12956 609 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL16A1-212ENST00000482478 LIG1P18858 919 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 AXLP30530 894 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 HOXA11P31270 313 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-212ENST00000482478 BCAR1P56945 870 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 PLCB3Q01970 1234 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 DLX2Q07687 328 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-212ENST00000482478 UBXN11Q5T124 520 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 DTHD1Q6ZMT9 781 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 EFHBQ8N7U6 833 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 FAM193BQ96PV7 902 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-212ENST00000482478 EIF2AQ9BY44 585 aaKnown RBP17.38■□□□□ 0.37
COL16A1-212ENST00000482478 NFKBIZQ9BYH8 718 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.38■□□□□ 0.37
COL16A1-212ENST00000482478 CD207Q9UJ71 328 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 KIAA1024Q9UPX6 916 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 IPPQ9Y573 584 aa17.38■□□□□ 0.37
COL16A1-212ENST00000482478 VPS37CA5D8V6 355 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-212ENST00000482478 PP2D1A8MPX8 630 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 FSCN2O14926 492 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 PER2O15055 1255 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 B4GALT5O43286 388 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 ZNF623O75123 536 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 ITGA4P13612 1032 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 MUTP22033 750 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 MLH1P40692 756 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 ERVFC1P60507 584 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 SMAD4Q13485 552 aaKnown RBP17.37■□□□□ 0.37
COL16A1-212ENST00000482478 SMC1AQ14683 1233 aaKnown RBP17.37■□□□□ 0.37
COL16A1-212ENST00000482478 CTC1Q2NKJ3 1217 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 PDE12Q6L8Q7 609 aaKnown RBP17.37■□□□□ 0.37
COL16A1-212ENST00000482478 TMC7Q7Z402 723 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 IFNLR1Q8IU57 520 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-212ENST00000482478 CNNM3Q8NE01 707 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 DEPTORQ8TB45 409 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 C2orf40Q9H1Z8 148 aa17.37■□□□□ 0.37
COL16A1-212ENST00000482478 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 CARNS1A5YM72 827 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 GRXCR2A6NFK2 248 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 OFD1O75665 1012 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 NPTXRO95502 500 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 POMCP01189 267 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 ARF4P18085 180 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 NCLP19338 710 aaKnown RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 LTBRP36941 435 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 PRPHP41219 470 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 POU5F1BQ06416 359 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 BMS1Q14692 1282 aaKnown RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 PPP2R5AQ15172 486 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 DUSP6Q16828 381 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 LARP1BQ659C4 914 aaKnown RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 CDCA2Q69YH5 1023 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 LLGL2Q6P1M3 1020 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 AGMOQ6ZNB7 445 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 TMEM173Q86WV6 379 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 CDR2LQ86X02 465 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 C4orf32Q8N8J7 132 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 IGSF22Q8N9C0 903 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 TMEM87AQ8NBN3 555 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 BSNDQ8WZ55 320 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 IFT74Q96LB3 600 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 CDCA3Q99618 268 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 KIFC3Q9BVG8 833 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 CSRNP2Q9H175 543 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 NXF3Q9H4D5 531 aaKnown RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 NGRNQ9NPE2 291 aaKnown RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 PRMT7Q9NVM4 692 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-212ENST00000482478 HES2Q9Y543 173 aa17.36■□□□□ 0.37
COL16A1-212ENST00000482478 VWA3AA6NCI4 1184 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 GLP2RO95838 553 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 CYP11B2P19099 503 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 ATP2C1P98194 919 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-212ENST00000482478 ECM1Q16610 540 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 AMHR2Q16671 573 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 SLC27A1Q6PCB7 646 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 SMG8Q8ND04 991 aaKnown RBP17.35■□□□□ 0.37
COL16A1-212ENST00000482478 CDK5RAP3Q96JB5 506 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 PRIMPOLQ96LW4 560 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 RPS6KC1Q96S38 1066 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 NRDE2Q9H7Z3 1164 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 UBN1Q9NPG3 1134 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 DNAJB4Q9UDY4 337 aa17.35■□□□□ 0.37
COL16A1-212ENST00000482478 HIDE1A8MVS5 230 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 PRKCBP05771 671 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 NAMPTP43490 491 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 SLC11A1P49279 550 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 SCNN1GP51170 649 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms