RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 PVALEFA0A1B0GWK0 134 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 TTLL13PA6NNM8 815 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 TSPAN1O60635 241 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 MAPTP10636 758 aaKnown RBP14.55□□□□□ -0.08
HDAC1-208ENST00000482310 HARSP12081 509 aaKnown RBP14.55□□□□□ -0.08
HDAC1-208ENST00000482310 MATR3P43243 847 aaKnown RBP eCLIP14.55□□□□□ -0.08
HDAC1-208ENST00000482310 MAGEA10P43363 369 aaPredicted RBP14.55□□□□□ -0.08
HDAC1-208ENST00000482310 EPHB4P54760 987 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 KCNA1Q09470 495 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 STK4Q13043 487 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 PPIGQ13427 754 aaKnown RBP eCLIP14.55□□□□□ -0.082e-7■■■■□ 21.2
HDAC1-208ENST00000482310 PRPF4BQ13523 1007 aaKnown RBP14.55□□□□□ -0.08
HDAC1-208ENST00000482310 CCDC183Q5T5S1 534 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 KIAA0895Q8NCT3 520 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 SEPT8Q92599 483 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 CCDC113Q9H0I3 377 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 ERVK-5Q9HDB9 667 aa14.55□□□□□ -0.08
HDAC1-208ENST00000482310 TULP1O00294 542 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-208ENST00000482310 GPR182O15218 404 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 MGEA5O60502 916 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 RFC2P35250 354 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 EFNA5P52803 228 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 OTOP2Q7RTS6 562 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 ZNF720Q7Z2F6 126 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 SYCP3Q8IZU3 236 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 TARS2Q9BW92 718 aaKnown RBP14.54□□□□□ -0.08
HDAC1-208ENST00000482310 NFKBIZQ9BYH8 718 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 TMX1Q9H3N1 280 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 IL23AQ9NPF7 189 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 OLFML3Q9NRN5 406 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 PRMT7Q9NVM4 692 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-208ENST00000482310 RMND1Q9NWS8 449 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 ANKFY1Q9P2R3 1169 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 TBX20Q9UMR3 447 aa14.54□□□□□ -0.08
HDAC1-208ENST00000482310 PDCD11Q14690 1871 aaKnown RBP14.54□□□□□ -0.08
HDAC1-208ENST00000482310 RALGAPA2Q2PPJ7 1873 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 FNDC1Q4ZHG4 1894 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-208ENST00000482310 ZBBXA8MT70 800 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 TISP43B9A030 160 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 H0YCG3 227 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 RHOBTB3O94955 611 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 ARF4P18085 180 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-208ENST00000482310 EHHADHQ08426 723 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 KCNB1Q14721 858 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 AMHR2Q16671 573 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 PLEKHG4Q58EX7 1191 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 NT5DC1Q5TFE4 455 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 TWF2Q6IBS0 349 aaKnown RBP14.53□□□□□ -0.08
HDAC1-208ENST00000482310 ZBTB33Q86T24 672 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 IFNLR1Q8IU57 520 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-208ENST00000482310 RPUSD2Q8IZ73 545 aaKnown RBP14.53□□□□□ -0.08
HDAC1-208ENST00000482310 ZNF710Q8N1W2 664 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 NOC3LQ8WTT2 800 aaKnown RBP14.53□□□□□ -0.08
HDAC1-208ENST00000482310 VWCEQ96DN2 955 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 LRCH3Q96II8 777 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 GSDMAQ96QA5 445 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 TMEM134Q9H6X4 195 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 AGPAT5Q9NUQ2 364 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 KIAA1468Q9P260 1216 aa14.53□□□□□ -0.08
HDAC1-208ENST00000482310 CNTNAP2Q9UHC6 1331 aa14.52□□□□□ -0.08
HDAC1-208ENST00000482310 HNRNPDLO14979 420 aaKnown RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 PPP1R37O75864 691 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 PARNO95453 639 aaKnown RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 NPTXRO95502 500 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 CXCL10P02778 98 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 ZSCAN20P17040 1043 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 LIG4P49917 911 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 GTF2BQ00403 316 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 POU5F1BQ06416 359 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 NCBP1Q09161 790 aaKnown RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 KLHL40Q2TBA0 621 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 ATF7IP2Q5U623 682 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 EEF1DP3Q658K8 133 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 KLHL10Q6JEL2 608 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 CNKSR3Q6P9H4 555 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 STXBP4Q6ZWJ1 553 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 ZNF365Q70YC5 407 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 ELOA2Q8IYF1 753 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 USP38Q8NB14 1042 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 RNF169Q8NCN4 708 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 SCFD1Q8WVM8 642 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 LINC01599Q8WXQ3 324 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 SYAP1Q96A49 352 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 ZBTB45Q96K62 511 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 ACCSQ96QU6 501 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 ADAM2Q99965 735 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.52□□□□□ -0.093e-6■■■□□ 16
HDAC1-208ENST00000482310 NTPCRQ9BSD7 190 aaKnown RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 MRPL4Q9BYD3 311 aaKnown RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 FZD8Q9H461 694 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 KCNG1Q9UIX4 513 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 PCDHB13Q9Y5F0 798 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 TTC3P53804 2025 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 KIAA1671Q9BY89 1806 aa14.52□□□□□ -0.09
HDAC1-208ENST00000482310 LAMA2P24043 3122 aaKnown RBP14.52□□□□□ -0.09
HDAC1-208ENST00000482310 ZMYM2Q9UBW7 1377 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 ACKR2O00590 384 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 SARSP49591 514 aaKnown RBP14.51□□□□□ -0.09
HDAC1-208ENST00000482310 PSMD2Q13200 908 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 ZNF658Q5TYW1 1059 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms