RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 GLRA2P23416 452 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 RPA1P27694 616 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 MCM7P33993 719 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 PBX3P40426 434 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 NDUFV1P49821 464 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 TOB1P50616 345 aaPredicted RBP10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 RBM10P98175 930 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 MBTD1Q05BQ5 628 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 PDIA5Q14554 519 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 SYCE2Q6PIF2 218 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 DDX53Q86TM3 631 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 RBM23Q86U06 439 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 TMEM173Q86WV6 379 aaPredicted RBP10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 NOSTRINQ8IVI9 506 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 RNF169Q8NCN4 708 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 SMG8Q8ND04 991 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 CNNM3Q8NE01 707 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 MICAL1Q8TDZ2 1067 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 PIGOQ8TEQ8 1089 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 IGSF21Q96ID5 467 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 TCF25Q9BQ70 676 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 KANSL3Q9P2N6 904 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 CNTNAP2Q9UHC6 1331 aa10.82□□□□□ -0.68
TMEM39A-207ENST00000482162 A0A087WWV3 80 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 A0A1B0GUA9 196 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 LOC730098B7Z3J9 87 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 LILRB3O75022 631 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 DDHD2O94830 711 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 OR52Z1P0C646 297 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 CTSAP10619 480 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 ALADP13716 330 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 HOXB8P17481 243 aaPredicted RBP10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 FXR2P51116 673 aaKnown RBP eCLIP10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 FOSBP53539 338 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 CAPSQ13938 189 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 TFDP1Q14186 410 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 RABEP1Q15276 862 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 ZNF174Q15697 407 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 CLUL1Q15846 466 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 FAM187BQ17R55 369 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 TMEM31Q5JXX7 168 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 EP400NLQ6ZTU2 488 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 ZNF280BQ86YH2 543 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 BCL7CQ8WUZ0 217 aaPredicted RBP10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 NACC1Q96RE7 527 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 POP1Q99575 1024 aaKnown RBP10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 TMEM175Q9BSA9 504 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 VN1R3Q9BXE9 311 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 CSRNP2Q9H175 543 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 FZD8Q9H461 694 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 UBN1Q9NPG3 1134 aa10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 BARX2Q9UMQ3 279 aaPredicted RBP10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 USP15Q9Y4E8 981 aaPredicted RBP10.81□□□□□ -0.68
TMEM39A-207ENST00000482162 DCXO43602 365 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 CLASP2O75122 1294 aaKnown RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 ARF4P18085 180 aaPredicted RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 CYP11B2P19099 503 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 SSTR3P32745 418 aaPredicted RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 TECP42680 631 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 SLC11A1P49279 550 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 DSC1Q08554 894 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 SMC1AQ14683 1233 aaKnown RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 HERC4Q5GLZ8 1057 aaPredicted RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 CDCA2Q69YH5 1023 aaPredicted RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 ANKRD54Q6NXT1 300 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 NOTUMQ6P988 496 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 TMC7Q7Z402 723 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 RNF168Q8IYW5 571 aaPredicted RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 IGSF22Q8N9C0 903 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 GSTCDQ8NEC7 633 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 MCPH1Q8NEM0 835 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 SLC22A17Q8WUG5 538 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 EIF2AQ9BY44 585 aaKnown RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 ZBP1Q9H171 429 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 RSAD1Q9HA92 442 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 BMP2KQ9NSY1 1161 aaPredicted RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 DNAJB4Q9UDY4 337 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 DAXXQ9UER7 740 aaPredicted RBP10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 IPPQ9Y573 584 aa10.8□□□□□ -0.68
TMEM39A-207ENST00000482162 ARID2Q68CP9 1835 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 ZMYM2Q9UBW7 1377 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 NT5C1B-RDH14C9J2C7 533 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 ZC3H11AO75152 810 aaKnown RBP eCLIP10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 CSPG5O95196 566 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 CXCL14O95715 111 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 ALDH2P05091 517 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 ATP2B1P20020 1258 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 GIT2Q14161 759 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 ECM1Q16610 540 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 LONRF3Q496Y0 759 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 PLPP4Q5VZY2 271 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 RNF135Q8IUD6 432 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 COLGALT2Q8IYK4 626 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 VPS52Q8N1B4 723 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 ERMNQ8TAM6 284 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 TMEM169Q96HH4 297 aa10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 PHF7Q9BWX1 381 aaPredicted RBP10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 POLR3FQ9H1D9 316 aaPredicted RBP10.79□□□□□ -0.68
TMEM39A-207ENST00000482162 GPRC5CQ9NQ84 441 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms