RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 C9IYK1 514 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 GPR182O15218 404 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 B4GALT5O43286 388 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 UPP2O95045 317 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 GJB5O95377 273 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 CA3P07451 260 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 NCLP19338 710 aaKnown RBP11.72□□□□□ -0.53
SSBP1-210ENST00000481508 PTENP60484 403 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 MBTD1Q05BQ5 628 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 DHX8Q14562 1220 aaKnown RBP11.72□□□□□ -0.53
SSBP1-210ENST00000481508 EXOC8Q8IYI6 725 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 SYT2Q8N9I0 419 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-210ENST00000481508 PHOSPHO2Q8TCD6 241 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 TOP1MTQ969P6 601 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 CALML4Q96GE6 196 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 CDK5RAP3Q96JB5 506 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 GDPD2Q9HCC8 539 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 RGS18Q9NS28 235 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 RCOR1Q9UKL0 485 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 PCDHA11Q9Y5I1 949 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 TRIP11Q15643 1979 aa11.72□□□□□ -0.53
SSBP1-210ENST00000481508 LRRIQ4A6NIV6 560 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 ASAP2O43150 1006 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 SLC26A4O43511 780 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 TSPAN1O60635 241 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 CUTAO60888 179 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 EFCAB14O75071 495 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 ATF7P17544 494 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-210ENST00000481508 HOXA11P31270 313 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-210ENST00000481508 HTRA4P83105 476 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-210ENST00000481508 MXD4Q14582 209 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-210ENST00000481508 UBXN11Q5T124 520 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 CDCA2Q69YH5 1023 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-210ENST00000481508 SRGAP1Q7Z6B7 1085 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 GPBP1Q86WP2 473 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 PDILTQ8N807 584 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 CPB2Q96IY4 423 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 RC3H2Q9HBD1 1191 aaKnown RBP11.71□□□□□ -0.53
SSBP1-210ENST00000481508 RNF19AQ9NV58 838 aa11.71□□□□□ -0.53
SSBP1-210ENST00000481508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-210ENST00000481508 EPOPA6NHQ4 379 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 INO80B-WBP1J3KQ70 363 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 TLL1O43897 1013 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 LINC00271P0C7V0 271 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 FGFR1P11362 822 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 SFPQP23246 707 aaKnown RBP eCLIP11.7□□□□□ -0.54
SSBP1-210ENST00000481508 GUCY2CP25092 1073 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 NAMPTP43490 491 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 PHKA2P46019 1235 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 ME1P48163 572 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 RAB30Q15771 203 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 E2F4Q16254 413 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 CATSPER4Q7RTX7 472 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 CDR2LQ86X02 465 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-210ENST00000481508 ZNF710Q8N1W2 664 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 RASSF8Q8NHQ8 419 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 KCNG4Q8TDN1 519 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 LARP4BQ92615 738 aaKnown RBP11.7□□□□□ -0.54
SSBP1-210ENST00000481508 REEP2Q9BRK0 252 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 FTHL17Q9BXU8 183 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 INO80BQ9C086 356 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-210ENST00000481508 CCDC113Q9H0I3 377 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 AGPAT5Q9NUQ2 364 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 HCSTQ9UBK5 93 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 CFAP45Q9UL16 551 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 PIN4Q9Y237 131 aaKnown RBP11.7□□□□□ -0.54
SSBP1-210ENST00000481508 C5orf42Q9H799 3197 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 PLXNA4Q9HCM2 1894 aa11.7□□□□□ -0.54
SSBP1-210ENST00000481508 TDRD15B5MCY1 1934 aaKnown RBP11.69□□□□□ -0.54
SSBP1-210ENST00000481508 DENND3A2RUS2 1198 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 LINC01553A4QN01 128 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 MYMKA6NI61 221 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 MEIS3P2A8K0S8 358 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 DGKIO75912 1065 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 ARF4P18085 180 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-210ENST00000481508 LIG1P18858 919 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 ANP32AP39687 249 aaKnown RBP11.69□□□□□ -0.54
SSBP1-210ENST00000481508 STAT6P42226 847 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 NPTX2P47972 431 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 SARSP49591 514 aaKnown RBP11.69□□□□□ -0.54
SSBP1-210ENST00000481508 PEX3P56589 373 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 KRT85P78386 507 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 NUCB2P80303 420 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 FAM189BP81408 668 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 CDC42EP1Q00587 391 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 TAP1Q03518 808 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 POU5F1BQ06416 359 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 GIT2Q14161 759 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 TFDP1Q14186 410 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 LONRF3Q496Y0 759 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 TPRNQ4KMQ1 711 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 RRAGBQ5VZM2 374 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 RESP18Q5W5W9 173 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 TAS1R3Q7RTX0 852 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 ZNF598Q86UK7 904 aaKnown RBP11.69□□□□□ -0.54
SSBP1-210ENST00000481508 ECHDC2Q86YB7 292 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 NPAS4Q8IUM7 802 aa11.69□□□□□ -0.54
SSBP1-210ENST00000481508 DEPTORQ8TB45 409 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms