RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 CCDC113Q9H0I3 377 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 NXF3Q9H4D5 531 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 MIOSQ9NXC5 875 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 CACNG4Q9UBN1 327 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 DNAJB4Q9UDY4 337 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 F8W810 466 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 STX6O43752 255 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 HIP1RO75146 1068 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 FGF18O76093 207 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 NPTXRO95502 500 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 RB1P06400 928 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 TFDP1Q14186 410 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 KARSQ15046 597 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 ARSHQ5FYA8 562 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 HYIQ5T013 277 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 NT5DC1Q5TFE4 455 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 RINT1Q6NUQ1 792 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 C1orf186Q6ZWK4 172 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 TAS1R3Q7RTX0 852 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 MRPL10Q7Z7H8 261 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 CABP7Q86V35 215 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 EXOC8Q8IYI6 725 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 MCPH1Q8NEM0 835 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 EPSTI1Q96J88 318 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 ZFP42Q96MM3 310 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 ASB2Q96Q27 587 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 TRAIPQ9BWF2 469 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 VN1R3Q9BXE9 311 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 CSRNP2Q9H175 543 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 BLOC1S4Q9NUP1 217 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 TBC1D13Q9NVG8 400 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 DACT1Q9NYF0 836 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 LMCD1Q9NZU5 365 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 FBXO2Q9UK22 296 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 IPPQ9Y573 584 aa12.63□□□□□ -0.39
RAPGEF1-207ENST00000481260 H3BQ06 376 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 ZNF623O75123 536 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 DDHD2O94830 711 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 ERLIN2O94905 339 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 EOMESO95936 686 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 POMCP01189 267 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 SSBP05455 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 AKAP5P24588 427 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 LTBRP36941 435 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 SLC12A3P55017 1021 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 DHX8Q14562 1220 aaKnown RBP12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 KCNT2Q6UVM3 1135 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 THNSL1Q8IYQ7 743 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 ABI1Q8IZP0 508 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 LRRC43Q8N309 656 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 VN1R2Q8NFZ6 395 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 RABGGTAQ92696 567 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 GAD1Q99259 594 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 PLVAPQ9BX97 442 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 GBP3Q9H0R5 595 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 FZD8Q9H461 694 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 PDZD7Q9H5P4 517 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 IGFLR1Q9H665 355 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 NRDE2Q9H7Z3 1164 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 KLK14Q9P0G3 267 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 DNM3Q9UQ16 869 aa12.62□□□□□ -0.39
RAPGEF1-207ENST00000481260 A0A087X0B3 334 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 HIDE1A8MVS5 230 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 PER2O15055 1255 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 ZC3H11AO75152 810 aaKnown RBP eCLIP12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 PLA2G4BP0C869 781 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 BMP1P13497 986 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 PLCG1P19174 1290 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 NCLP19338 710 aaKnown RBP12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 PDCP20941 246 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 MUTP22033 750 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 KCNA5P22460 613 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 IGFBP6P24592 240 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 MLH1P40692 756 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 NPTX2P47972 431 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 SLC11A1P49279 550 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 PEX3P56589 373 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 BCAR1P56945 870 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 POU5F1BQ06416 359 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 MCM6Q14566 821 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 CLUL1Q15846 466 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 PTPROQ16827 1216 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 NOMO2Q5JPE7 1267 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 ARL6IP4Q66PJ3 421 aaKnown RBP12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 RBM23Q86U06 439 aaKnown RBP12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 HSCBQ8IWL3 235 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 SLC39A11Q8N1S5 342 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 TMEM130Q8N3G9 435 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 FEZF2Q8TBJ5 459 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 AUTS2Q8WXX7 1259 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 P2RX5Q93086 422 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 HLA-CQ95604 372 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 NFKBIZQ9BYH8 718 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 RAB34Q9BZG1 259 aa12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 UBE2ZQ9H832 354 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 TFIP11Q9UBB9 837 aaKnown RBP12.61□□□□□ -0.39
RAPGEF1-207ENST00000481260 TCF20Q9UGU0 1960 aaKnown RBP12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 A0A1B0GUA9 196 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms