RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 PRMT7Q9NVM4 692 aaPredicted RBP22.28■■□□□ 1.16
VPS36-204ENST00000480923 CLIC4Q9Y696 253 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 UNC80Q8N2C7 3258 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 OFD1O75665 1012 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 LIG1P18858 919 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 NCLP19338 710 aaKnown RBP22.27■■□□□ 1.16
VPS36-204ENST00000480923 UBA7P41226 1012 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 CAMK1Q14012 370 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 TMEM132AQ24JP5 1023 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 NOMO2Q5JPE7 1267 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 PPP4R3CPQ6ZMV5 832 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 AGMOQ6ZNB7 445 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 URGCPQ8TCY9 931 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 RUSC1Q9BVN2 902 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 TRIM6Q9C030 488 aaPredicted RBP22.27■■□□□ 1.16
VPS36-204ENST00000480923 RSAD1Q9HA92 442 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 TSHZ2Q9NRE2 1034 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 IPPQ9Y573 584 aa22.27■■□□□ 1.16
VPS36-204ENST00000480923 HIP1RO75146 1068 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 ITGA4P13612 1032 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 PPM1AP35813 382 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 LONP1P36776 959 aaKnown RBP22.26■■□□□ 1.15
VPS36-204ENST00000480923 CEBPZQ03701 1054 aaKnown RBP22.26■■□□□ 1.15
VPS36-204ENST00000480923 UBE3AQ05086 875 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 RNASELQ05823 741 aaKnown RBP22.26■■□□□ 1.15
VPS36-204ENST00000480923 MAPK6Q16659 721 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 TMEM119Q4V9L6 283 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 RINT1Q6NUQ1 792 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 EP400NLQ6ZTU2 488 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 CDR2LQ86X02 465 aaPredicted RBP22.26■■□□□ 1.15
VPS36-204ENST00000480923 KCTD17Q8N5Z5 321 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 SMG8Q8ND04 991 aaKnown RBP22.26■■□□□ 1.15
VPS36-204ENST00000480923 RASSF8Q8NHQ8 419 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 MICAL1Q8TDZ2 1067 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 SYMPKQ92797 1274 aaKnown RBP22.26■■□□□ 1.15
VPS36-204ENST00000480923 CALML4Q96GE6 196 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 PRIMPOLQ96LW4 560 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 KIFC3Q9BVG8 833 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 COL25A1Q9BXS0 654 aaPredicted RBP22.26■■□□□ 1.15
VPS36-204ENST00000480923 FZD8Q9H461 694 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 UBE2ZQ9H832 354 aaPredicted RBP22.26■■□□□ 1.15
VPS36-204ENST00000480923 TBC1D13Q9NVG8 400 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 SPG21Q9NZD8 308 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 KIAA1671Q9BY89 1806 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 CNTNAP2Q9UHC6 1331 aa22.26■■□□□ 1.15
VPS36-204ENST00000480923 ZC3H11AO75152 810 aaKnown RBP eCLIP22.25■■□□□ 1.15
VPS36-204ENST00000480923 NPTXRO95502 500 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 PRKCBP05771 671 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 IRS1P35568 1242 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 GRIN1Q05586 938 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 SLC27A1Q6PCB7 646 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 C1orf186Q6ZWK4 172 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 PPP2R3CQ969Q6 453 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 DRC1Q96MC2 740 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 APOL6Q9BWW8 343 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 GBP3Q9H0R5 595 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 ZSCAN16Q9H4T2 348 aaPredicted RBP22.25■■□□□ 1.15
VPS36-204ENST00000480923 UBN1Q9NPG3 1134 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 TLR9Q9NR96 1032 aa22.25■■□□□ 1.15
VPS36-204ENST00000480923 PUF60Q9UHX1 559 aaKnown RBP22.25■■□□□ 1.15
VPS36-204ENST00000480923 A0A1B0GUA9 196 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 CCDC169A6NNP5 214 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 SLC26A4O43511 780 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 MARCKSP29966 332 aaPredicted RBP22.24■■□□□ 1.15
VPS36-204ENST00000480923 ALDH7A1P49419 539 aaKnown RBP22.24■■□□□ 1.15
VPS36-204ENST00000480923 KCNQ1P51787 676 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 BCAR1P56945 870 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 PLCB3Q01970 1234 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 KRT17Q04695 432 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 PRPF4BQ13523 1007 aaKnown RBP22.24■■□□□ 1.15
VPS36-204ENST00000480923 PTPAQ15257 358 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 FAM187BQ17R55 369 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 HACE1Q8IYU2 909 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 SYT2Q8N9I0 419 aaPredicted RBP22.24■■□□□ 1.15
VPS36-204ENST00000480923 MRPS27Q92552 414 aaKnown RBP22.24■■□□□ 1.15
VPS36-204ENST00000480923 RNF39Q9H2S5 420 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 IGFLR1Q9H665 355 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 HES2Q9Y543 173 aa22.24■■□□□ 1.15
VPS36-204ENST00000480923 NT5C1B-RDH14C9J2C7 533 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 PLA2G4BP0C869 781 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 KCNA5P22460 613 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 EFNA5P52803 228 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 PEX3P56589 373 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 RAD51AP2Q09MP3 1159 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 HYAL1Q12794 435 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 DAW1Q8N136 415 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 SLC39A11Q8N1S5 342 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 TIPINQ9BVW5 301 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 CCDC113Q9H0I3 377 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 NXF3Q9H4D5 531 aaKnown RBP22.23■■□□□ 1.15
VPS36-204ENST00000480923 NRDE2Q9H7Z3 1164 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 CLDND1Q9NY35 253 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 KANSL3Q9P2N6 904 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 LZTS1Q9Y250 596 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 PCDHGC5Q9Y5F6 944 aa22.23■■□□□ 1.15
VPS36-204ENST00000480923 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.22■■□□□ 1.15
VPS36-204ENST00000480923 TTLL13PA6NNM8 815 aa22.22■■□□□ 1.15
VPS36-204ENST00000480923 ACKR2O00590 384 aa22.22■■□□□ 1.15
VPS36-204ENST00000480923 N4BP3O15049 544 aa22.22■■□□□ 1.15
VPS36-204ENST00000480923 NCK2O43639 380 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 215 ms