RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 ZBTB5O15062 677 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 OAS1P00973 400 aaKnown RBP22.28■■□□□ 1.16
COL13A1-208ENST00000479733 SLMAPQ14BN4 828 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 ANKRD20A2Q5SQ80 823 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 ANKRD20A1Q5TYW2 823 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 ANKRD20A3Q5VUR7 823 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 MYCT1Q8N699 235 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 CRAMP1Q96RY5 1269 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 PCDHA1Q9Y5I3 950 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 PODXLO00592 558 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 ALADP13716 330 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 MPP2Q14168 576 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 TRIP13Q15645 432 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-208ENST00000479733 TBC1D16Q8TBP0 767 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 YIPF3Q9GZM5 350 aa22.28■■□□□ 1.16
COL13A1-208ENST00000479733 ATP2A2P16615 1042 aaKnown RBP22.27■■□□□ 1.16
COL13A1-208ENST00000479733 PSMC2P35998 433 aaKnown RBP22.27■■□□□ 1.16
COL13A1-208ENST00000479733 ZNF131P52739 623 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 RHBDL3P58872 404 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 LACTBP83111 547 aaPredicted RBP22.27■■□□□ 1.16
COL13A1-208ENST00000479733 ATP11AP98196 1134 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 SEL1L2Q5TEA6 688 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 VSTM1Q6UX27 236 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 FAM47EQ6ZV65 393 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 ARMC2Q8NEN0 867 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 PAIP2Q9BPZ3 127 aaKnown RBP22.27■■□□□ 1.16
COL13A1-208ENST00000479733 INTS2Q9H0H0 1204 aaKnown RBP22.27■■□□□ 1.16
COL13A1-208ENST00000479733 ARL2BPQ9Y2Y0 163 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 PCDHA3Q9Y5H8 950 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 SYNGAP1Q96PV0 1343 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 GPR75-ASB3A0A0A6YYF3 556 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 UBAP1LF5GYI3 381 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 ZBTB39O15060 712 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 TAL1P17542 331 aaPredicted RBP22.27■■□□□ 1.16
COL13A1-208ENST00000479733 RNASELQ05823 741 aaKnown RBP22.27■■□□□ 1.16
COL13A1-208ENST00000479733 CALCOCO2Q13137 446 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 IFT74Q96LB3 600 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 PWWP2AQ96N64 755 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 TAOK3Q9H2K8 898 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 ETNK1Q9HBU6 452 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 PARP2Q9UGN5 583 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 IRS2Q9Y4H2 1338 aa22.27■■□□□ 1.16
COL13A1-208ENST00000479733 BTNL9Q6UXG8 535 aa22.27■■□□□ 1.15
COL13A1-208ENST00000479733 ZNF804AQ7Z570 1209 aa22.27■■□□□ 1.15
COL13A1-208ENST00000479733 C1orf54Q8WWF1 131 aa22.27■■□□□ 1.15
COL13A1-208ENST00000479733 TGS1Q96RS0 853 aaKnown RBP22.27■■□□□ 1.15
COL13A1-208ENST00000479733 ZSWIM1Q9BR11 485 aa22.27■■□□□ 1.15
COL13A1-208ENST00000479733 ARHGEF3Q9NR81 526 aa22.27■■□□□ 1.15
COL13A1-208ENST00000479733 ATF5Q9Y2D1 282 aaPredicted RBP22.27■■□□□ 1.15
COL13A1-208ENST00000479733 SLC16A3O15427 465 aaKnown RBP22.26■■□□□ 1.15
COL13A1-208ENST00000479733 TM4SF1P30408 202 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 COILP38432 576 aaPredicted RBP22.26■■□□□ 1.15
COL13A1-208ENST00000479733 ERMNQ8TAM6 284 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 MXD3Q9BW11 206 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 PCYOX1Q9UHG3 505 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 BRAFP15056 766 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 CHKAP35790 457 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 VPS41P49754 854 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 TAF11Q15544 211 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 PHLDB3Q6NSJ2 640 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 CYP2W1Q8TAV3 490 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 BORCS6Q96GS4 357 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 ACP6Q9NPH0 428 aa22.26■■□□□ 1.15
COL13A1-208ENST00000479733 TTLL1O95922 423 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 DLATP10515 647 aaKnown RBP22.25■■□□□ 1.15
COL13A1-208ENST00000479733 STX2P32856 288 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 SPIRE1Q08AE8 756 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 KYNUQ16719 465 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 MFSD14BQ5SR56 506 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 ART4Q93070 314 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 P2RX7Q99572 595 aaKnown RBP22.25■■□□□ 1.15
COL13A1-208ENST00000479733 AGPAT1Q99943 283 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 SYT11Q9BT88 431 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 SNHG28P0DPA3 235 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 MYBL1P10243 752 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 CTNNA2P26232 953 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 RPA1P27694 616 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 MGAT5Q09328 741 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 GRIK3Q13003 919 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 QRICH1Q2TAL8 776 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 TNFAIP8L3Q5GJ75 292 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 TPTE2Q6XPS3 522 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 CROCCP2Q86T23 111 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 SLFN12Q8IYM2 578 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 ZNF483Q8TF39 744 aaPredicted RBP22.25■■□□□ 1.15
COL13A1-208ENST00000479733 UBE2TQ9NPD8 197 aaPredicted RBP22.25■■□□□ 1.15
COL13A1-208ENST00000479733 APEX2Q9UBZ4 518 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 ASIC3Q9UHC3 531 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 MYO3BQ8WXR4 1341 aa22.25■■□□□ 1.15
COL13A1-208ENST00000479733 GTPBP10A4D1E9 387 aaKnown RBP22.24■■□□□ 1.15
COL13A1-208ENST00000479733 SPOPO43791 374 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 SMNDC1O75940 238 aaKnown RBP eCLIP22.24■■□□□ 1.15
COL13A1-208ENST00000479733 FAM13AO94988 1023 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 ARHGAP4P98171 946 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 PPP1R18Q6NYC8 613 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 GBP7Q8N8V2 638 aaPredicted RBP22.24■■□□□ 1.15
COL13A1-208ENST00000479733 TMEM109Q9BVC6 243 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 RXFP1Q9HBX9 757 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 MIS18BP1Q6P0N0 1132 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 SRRM1Q8IYB3 904 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms