RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 NCK2O43639 380 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 FGF18O76093 207 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 ARF4P18085 180 aaPredicted RBP11.66□□□□□ -0.54
SP140-210ENST00000479539 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
SP140-210ENST00000479539 TFF2Q03403 129 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 SF3A1Q15459 793 aaKnown RBP11.66□□□□□ -0.54
SP140-210ENST00000479539 FAM187BQ17R55 369 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 AAK1Q2M2I8 961 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 NOMO2Q5JPE7 1267 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 NOTUMQ6P988 496 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 KCNT2Q6UVM3 1135 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 GLB1LQ6UWU2 654 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 AGMOQ6ZNB7 445 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 C1orf186Q6ZWK4 172 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 SMG8Q8ND04 991 aaKnown RBP11.66□□□□□ -0.54
SP140-210ENST00000479539 CNNM3Q8NE01 707 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 SYMPKQ92797 1274 aaKnown RBP11.66□□□□□ -0.54
SP140-210ENST00000479539 LPPQ93052 612 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 PRIMPOLQ96LW4 560 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 ZNF558Q96NG5 402 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 COL25A1Q9BXS0 654 aaPredicted RBP11.66□□□□□ -0.54
SP140-210ENST00000479539 CSRNP2Q9H175 543 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 C2orf40Q9H1Z8 148 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 UBE2ZQ9H832 354 aaPredicted RBP11.66□□□□□ -0.54
SP140-210ENST00000479539 PRMT7Q9NVM4 692 aaPredicted RBP11.66□□□□□ -0.54
SP140-210ENST00000479539 LZTS1Q9Y250 596 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 MYO7AQ13402 2215 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 CNTNAP2Q9UHC6 1331 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 INPPL1O15357 1258 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 B4GALT5O43286 388 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 STX6O43752 255 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 BMP1P13497 986 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 GUCY2CP25092 1073 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 IRS1P35568 1242 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 PPM1AP35813 382 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 LONP1P36776 959 aaKnown RBP11.65□□□□□ -0.54
SP140-210ENST00000479539 PPP2R5AQ15172 486 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 PTPAQ15257 358 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 LONRF3Q496Y0 759 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 TMEM119Q4V9L6 283 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 RINT1Q6NUQ1 792 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 ZBTB8OSQ8IWT0 167 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 THNSL1Q8IYQ7 743 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 DAW1Q8N136 415 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 SYT2Q8N9I0 419 aaPredicted RBP11.65□□□□□ -0.54
SP140-210ENST00000479539 PABPC5Q96DU9 382 aaKnown RBP11.65□□□□□ -0.54
SP140-210ENST00000479539 CPB2Q96IY4 423 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 EIF2AQ9BY44 585 aaKnown RBP11.65□□□□□ -0.54
SP140-210ENST00000479539 NT5C3AQ9H0P0 336 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 ZSCAN16Q9H4T2 348 aaPredicted RBP11.65□□□□□ -0.54
SP140-210ENST00000479539 POLD4Q9HCU8 107 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 UBN1Q9NPG3 1134 aa11.65□□□□□ -0.54
SP140-210ENST00000479539 PUF60Q9UHX1 559 aaKnown RBP11.65□□□□□ -0.54
SP140-210ENST00000479539 BRWD1Q9NSI6 2320 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 CARNS1A5YM72 827 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 ACKR2O00590 384 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 FSCN2O14926 492 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 ALDH7A1P49419 539 aaKnown RBP11.64□□□□□ -0.55
SP140-210ENST00000479539 EFNA5P52803 228 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 ERVFC1P60507 584 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 KRT17Q04695 432 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 GRIN1Q05586 938 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 HYAL1Q12794 435 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 MAPK7Q13164 816 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 GSE1Q14687 1217 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 ZRSR1Q15695 479 aaKnown RBP11.64□□□□□ -0.55
SP140-210ENST00000479539 MAPK6Q16659 721 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 CTC1Q2NKJ3 1217 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 PDE12Q6L8Q7 609 aaKnown RBP11.64□□□□□ -0.55
SP140-210ENST00000479539 CABP7Q86V35 215 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 SLC39A11Q8N1S5 342 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 DEPTORQ8TB45 409 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 MRPS27Q92552 414 aaKnown RBP11.64□□□□□ -0.55
SP140-210ENST00000479539 IFT74Q96LB3 600 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 RUSC1Q9BVN2 902 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 TIPINQ9BVW5 301 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 CCDC113Q9H0I3 377 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 NRDE2Q9H7Z3 1164 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 RSAD1Q9HA92 442 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 C17orf75Q9HAS0 396 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 TBC1D13Q9NVG8 400 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 SPG21Q9NZD8 308 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 KANSL3Q9P2N6 904 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 DAXXQ9UER7 740 aaPredicted RBP11.64□□□□□ -0.55
SP140-210ENST00000479539 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
SP140-210ENST00000479539 IPPQ9Y573 584 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 CLIC4Q9Y696 253 aa11.64□□□□□ -0.55
SP140-210ENST00000479539 MORC2Q9Y6X9 1032 aaPredicted RBP11.64□□□□□ -0.55
SP140-210ENST00000479539 TTLL13PA6NNM8 815 aa11.63□□□□□ -0.55
SP140-210ENST00000479539 HIP1RO75146 1068 aa11.63□□□□□ -0.55
SP140-210ENST00000479539 GALTP07902 379 aa11.63□□□□□ -0.55
SP140-210ENST00000479539 PLA2G4BP0C869 781 aa11.63□□□□□ -0.55
SP140-210ENST00000479539 ITGA4P13612 1032 aa11.63□□□□□ -0.55
SP140-210ENST00000479539 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
SP140-210ENST00000479539 PBX3P40426 434 aa11.63□□□□□ -0.55
SP140-210ENST00000479539 UBA7P41226 1012 aa11.63□□□□□ -0.55
SP140-210ENST00000479539 AFF1P51825 1210 aaKnown RBP11.63□□□□□ -0.55
SP140-210ENST00000479539 SLC12A3P55017 1021 aa11.63□□□□□ -0.55
SP140-210ENST00000479539 BCAR1P56945 870 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms