RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 NPTX2P47972 431 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 HTRA4P83105 476 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-222ENST00000478095 POU5F1BQ06416 359 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 DMP1Q13316 513 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-222ENST00000478095 PAN2Q504Q3 1202 aaKnown RBP11.34□□□□□ -0.59
HDAC6-222ENST00000478095 RESP18Q5W5W9 173 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 DYMQ7RTS9 669 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 CDR2LQ86X02 465 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-222ENST00000478095 ECHDC2Q86YB7 292 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 TMC2Q8TDI7 906 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 STAMQ92783 540 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 TIPINQ9BVW5 301 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 NFKBIZQ9BYH8 718 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 C2orf40Q9H1Z8 148 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 ZHX3Q9H4I2 956 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 ZNF576Q9H609 170 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 KCND2Q9NZV8 630 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 MTUS1Q9ULD2 1270 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 INSL6Q9Y581 213 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 PCDHB7Q9Y5E2 793 aa11.34□□□□□ -0.59
HDAC6-222ENST00000478095 A0A0U1RQF3 1178 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 LINC01553A4QN01 128 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 SLC16A4O15374 487 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 TBCAO75347 108 aaKnown RBP11.33□□□□□ -0.6
HDAC6-222ENST00000478095 DGKIO75912 1065 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 FAM13AO94988 1023 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 EDN1P05305 212 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 PRKCBP05771 671 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 PLS3P13797 630 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 ATF7P17544 494 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-222ENST00000478095 ARF4P18085 180 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-222ENST00000478095 TAP1Q03518 808 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 GIT2Q14161 759 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 TMEM132AQ24JP5 1023 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 SV2BQ7L1I2 683 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 CRIPAKQ8N1N5 446 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 LPPQ93052 612 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 EIF2AQ9BY44 585 aaKnown RBP11.33□□□□□ -0.6
HDAC6-222ENST00000478095 SCAND2PQ9GZW5 306 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-222ENST00000478095 CCDC113Q9H0I3 377 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 KMT5AQ9NQR1 393 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 CHST12Q9NRB3 414 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 FAM105AQ9NUU6 356 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 PRMT7Q9NVM4 692 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-222ENST00000478095 TMEM161AQ9NX61 479 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 DACT1Q9NYF0 836 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 FAM13BQ9NYF5 915 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 RBM19Q9Y4C8 960 aaKnown RBP11.33□□□□□ -0.6
HDAC6-222ENST00000478095 WDR81Q562E7 1941 aa11.33□□□□□ -0.6
HDAC6-222ENST00000478095 ARID2Q68CP9 1835 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 TMEM265A0A087WTH1 108 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 A0A1B0GVL5 298 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 MYMKA6NI61 221 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 TBKBP1A7MCY6 615 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 MEIS3P2A8K0S8 358 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 POLR2DO15514 142 aaKnown RBP11.32□□□□□ -0.6
HDAC6-222ENST00000478095 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-222ENST00000478095 PFKFB1P16118 471 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 FAM189BP81408 668 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 NCBP1Q09161 790 aaKnown RBP11.32□□□□□ -0.6
HDAC6-222ENST00000478095 PRPF4BQ13523 1007 aaKnown RBP11.32□□□□□ -0.6
HDAC6-222ENST00000478095 BTG3Q14201 252 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-222ENST00000478095 GRIN2CQ14957 1233 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 E2F4Q16254 413 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 MAPK6Q16659 721 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 UBXN11Q5T124 520 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 MYCT1Q8N699 235 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 ARNTL2Q8WYA1 636 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 DDX12PQ92771 950 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 GUCD1Q96NT3 240 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 C17orf80Q9BSJ5 609 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 FZD8Q9H461 694 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 PRDM12Q9H4Q4 367 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 RC3H2Q9HBD1 1191 aaKnown RBP11.32□□□□□ -0.6
HDAC6-222ENST00000478095 RNF19AQ9NV58 838 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 ARHGAP28Q9P2N2 729 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 KCNH3Q9ULD8 1083 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 ODF2LQ9ULJ1 636 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 SZT2Q5T011 3432 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 PHLPP2Q6ZVD8 1323 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 CNTNAP2Q9UHC6 1331 aa11.32□□□□□ -0.6
HDAC6-222ENST00000478095 EVPLQ92817 2033 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 EPOPA6NHQ4 379 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 K7ENM7 598 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 K7ERI5 159 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 RFXAPO00287 272 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 NPTXRO95502 500 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 IDEP14735 1019 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 AXLP30530 894 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 EFNA5P52803 228 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDAC6-222ENST00000478095 FAM187BQ17R55 369 aa11.31□□□□□ -0.6
HDAC6-222ENST00000478095 CLLU1OSQ5K130 101 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms