RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 LUC7L2Q9Y383 392 aaKnown RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 FHOD1Q9Y613 1164 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 EPN1Q9Y6I3 576 aaPredicted RBP5.48□□□□□ -1.53
SF3B6-202ENST00000478050 PSME4Q14997 1843 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 ABCB11O95342 1321 aa5.48□□□□□ -1.53
SF3B6-202ENST00000478050 SLX4Q8IY92 1834 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 IGKV6D-41A0A0C4DH26 115 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 PVALEFA0A1B0GWK0 134 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 A0A1W2PQJ5 194 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 KLRG2A4D1S0 409 aaPredicted RBP5.47□□□□□ -1.53
SF3B6-202ENST00000478050 CCDC151A5D8V7 595 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 TRIM49BA6NDI0 452 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 H3BRJ5 948 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 NDUFB5O43674 189 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 ERLIN1O75477 346 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 NDUFA10O95299 355 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 RECKO95980 971 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 SNHG28P0DPA3 235 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 PDHBP11177 359 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 BRD2P25440 801 aaKnown RBP5.47□□□□□ -1.53
SF3B6-202ENST00000478050 CDC25AP30304 524 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 ARHGAP25P42331 645 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 ARL4DP49703 201 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 CHMP4BP1P59074 171 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 KRT83P78385 493 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 GABPAQ06546 454 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 PDIA5Q14554 519 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 SEPT2Q15019 361 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 TRIP4Q15650 581 aaPredicted RBP5.47□□□□□ -1.53
SF3B6-202ENST00000478050 PKN2Q16513 984 aaKnown RBP5.47□□□□□ -1.53
SF3B6-202ENST00000478050 CALCRLQ16602 461 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 FBLN7Q53RD9 439 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 FIGNQ5HY92 759 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 COX20Q5RI15 118 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 FKBP15Q5T1M5 1219 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 CC2D1AQ6P1N0 951 aaPredicted RBP5.47□□□□□ -1.53
SF3B6-202ENST00000478050 PAOXQ6QHF9 649 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 UNC13DQ70J99 1090 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 SV2BQ7L1I2 683 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 ZNF771Q7L3S4 317 aaPredicted RBP5.47□□□□□ -1.53
SF3B6-202ENST00000478050 NCAPG2Q86XI2 1143 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 CCDC170Q8IYT3 715 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 CSGALNACT2Q8N6G5 542 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 MSANTD4Q8NCY6 345 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 ACRBPQ8NEB7 543 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 TBCKQ8TEA7 893 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 SLC7A3Q8WY07 619 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 CDK5RAP3Q96JB5 506 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 CNOT6LQ96LI5 555 aaKnown RBP5.47□□□□□ -1.53
SF3B6-202ENST00000478050 ERGIC2Q96RQ1 377 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 DUSP9Q99956 384 aaKnown RBP5.47□□□□□ -1.53
SF3B6-202ENST00000478050 SLF1Q9BQI6 1058 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 TUBGCP2Q9BSJ2 902 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 COA1Q9GZY4 146 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 SAP130Q9H0E3 1048 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 GBP3Q9H0R5 595 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 GLT8D2Q9H1C3 349 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 HAUS4Q9H6D7 363 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 ARFGAP3Q9NP61 516 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 OSGEPQ9NPF4 335 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 ZNHIT6Q9NWK9 470 aaKnown RBP5.47□□□□□ -1.53
SF3B6-202ENST00000478050 MTMR4Q9NYA4 1195 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 MAPK8IP1Q9UQF2 711 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 DAGLAQ9Y4D2 1042 aa5.47□□□□□ -1.53
SF3B6-202ENST00000478050 MYH11P35749 1972 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 PNMA6FA0A0J9YX94 578 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 FAM95CA0A1B0GW59 222 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 TTC26A0AVF1 554 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CTAGE15A4D2H0 777 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 DBX1A6NMT0 343 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 EIF3CLB5ME19 914 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 PES1O00541 588 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 AOC2O75106 756 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 IPO7O95373 1038 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 TTLL1O95922 423 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 HLA-DOAP06340 250 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 P4HBP07237 508 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CTAGE8P0CG41 777 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 GCFC2P16383 781 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 TECP42680 631 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 MTIF2P46199 727 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 USP11P51784 963 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 MRPL12P52815 198 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 PMS1P54277 932 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 ZBED6P86452 979 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CDK17Q00537 523 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 LRRC63Q05C16 580 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CKAP4Q07065 602 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 ZNF543Q08ER8 600 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 PSMD2Q13200 908 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 GRB10Q13322 594 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 TERF2Q15554 542 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 ZNF124Q15973 351 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 MEA1Q16626 185 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 TMEM119Q4V9L6 283 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 GPATCH4Q5T3I0 446 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 KRT79Q5XKE5 535 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 PPP4R3AQ6IN85 833 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CENPPQ6IPU0 288 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 C16orf46Q6P387 395 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms