RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 RBM8AQ9Y5S9 174 aaKnown RBP6.12□□□□□ -1.43
SMNDC1-205ENST00000477763 SLC30A1Q9Y6M5 507 aa6.12□□□□□ -1.43
SMNDC1-205ENST00000477763 MTSS1O43312 755 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 RAD17O75943 681 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 CLEC2LP0C7M8 214 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 HNRNPLP14866 589 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 RAB27AP51159 221 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 NRG3P56975 720 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 ADAM8P78325 824 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 KRT85P78386 507 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 ATP2C1P98194 919 aaPredicted RBP6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 PPARAQ07869 468 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 CT83Q5H943 113 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 GLB1L2Q8IW92 636 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 HOOK2Q96ED9 719 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 LOXL4Q96JB6 756 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 FDXACB1Q9BRP7 624 aaPredicted RBP6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 CD248Q9HCU0 757 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 SMPD4Q9NXE4 827 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 USP18Q9UMW8 372 aa6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 ZFR2Q9UPR6 939 aaKnown RBP6.11□□□□□ -1.43
SMNDC1-205ENST00000477763 JUNP05412 331 aaKnown RBP6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 VSIG10L2P0DP72 767 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 GAAP10253 952 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 MAGEA10P43363 369 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 KIR2DL3P43628 341 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 RECQLP46063 649 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 BPIFB4P59827 614 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 MRPS9P82933 396 aaKnown RBP6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 SPIDRQ14159 915 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 TRIM25Q14258 630 aaKnown RBP6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 ICAM4Q14773 271 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 PCBP2Q15366 365 aaKnown RBP eCLIP6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 NFE2Q16621 373 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 GPR135Q8IZ08 494 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 SHCBP1Q8NEM2 672 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 SSH1Q8WYL5 1049 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 PAWRQ96IZ0 340 aaKnown RBP6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 UIMC1Q96RL1 719 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 PLA2G12BQ9BX93 195 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 KCTD10Q9H3F6 313 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 CCM2LQ9NUG4 571 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 CDY2AQ9Y6F7 541 aa6.1□□□□□ -1.43
SMNDC1-205ENST00000477763 A0A1W2PR48 441 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 AKAP10O43572 662 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 XPOTO43592 962 aaKnown RBP6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 FOXS1O43638 330 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 ZNF623O75123 536 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 TOX4O94842 621 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 PARNO95453 639 aaKnown RBP6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 LY86O95711 162 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 CT47B1P0C2W7 299 aaPredicted RBP6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 MEF2AQ02078 507 aaPredicted RBP6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 CD69Q07108 199 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 PIN1Q13526 163 aaPredicted RBP6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 RIN1Q13671 783 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 ACAP2Q15057 778 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 TOR2AQ5JU69 321 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 EFCAB2Q5VUJ9 269 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 LMBR1LQ6UX01 489 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 GAREM2Q75VX8 874 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 FMNL3Q8IVF7 1028 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 ANKRD53Q8N9V6 530 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 CHST13Q8NET6 341 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 Q8TCH9 128 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 CAMKK2Q96RR4 588 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 GPHA2Q96T91 129 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 C1QTNF3Q9BXJ4 246 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 CHPF2Q9P2E5 772 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 EVLQ9UI08 416 aaPredicted RBP6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 EDARQ9UNE0 448 aa6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 LUC7L2Q9Y383 392 aaKnown RBP6.09□□□□□ -1.43
SMNDC1-205ENST00000477763 LPLP06858 475 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 SLC5A3P53794 718 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 LGALS4P56470 323 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 SRSF2Q01130 221 aaKnown RBP6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 SAFB2Q14151 953 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 HS1BP3Q53T59 392 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 TAS1R1Q7RTX1 841 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 POLNQ7Z5Q5 900 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 RAVER1Q8IY67 606 aaKnown RBP6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 CHPFQ8IZ52 775 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 FUKQ8N0W3 1084 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 PIK3C3Q8NEB9 887 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 AUTS2Q8WXX7 1259 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 QRSL1Q9H0R6 528 aaKnown RBP6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 PRDM12Q9H4Q4 367 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 AGO3Q9H9G7 860 aaKnown RBP6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 ZIM2Q9NZV7 527 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 ZNF180Q9UJW8 692 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 GPR45Q9Y5Y3 372 aa6.08□□□□□ -1.44
SMNDC1-205ENST00000477763 FZD9O00144 591 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 NRP1O14786 923 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 ZSCAN20P17040 1043 aaPredicted RBP6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 SELENOPP49908 381 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 WNT3AP56704 352 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 KCNK18Q7Z418 384 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 PRRT2Q7Z6L0 340 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms