RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 GPC5P78333 572 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 RRP1BQ14684 758 aaKnown RBP19.53■□□□□ 0.72
CCM2-209ENST00000477605 KRT71Q3SY84 523 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 SPICE1Q8N0Z3 855 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 CYFIP2Q96F07 1278 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 ACCSQ96QU6 501 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 LXNQ9BS40 222 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 FAM129AQ9BZQ8 928 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 DPH5Q9H2P9 285 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 DBR1Q9UK59 544 aaKnown RBP19.53■□□□□ 0.72
CCM2-209ENST00000477605 NOVA2Q9UNW9 492 aaKnown RBP19.53■□□□□ 0.72
CCM2-209ENST00000477605 ALG6Q9Y672 507 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 PODXLO00592 558 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 IFFO1Q0D2I5 559 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 PRPF4BQ13523 1007 aaKnown RBP19.53■□□□□ 0.72
CCM2-209ENST00000477605 ARHGAP44Q17R89 818 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 KIAA1755Q5JYT7 1200 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 NIPA1Q7RTP0 329 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 KSR1Q8IVT5 923 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 PSMD1Q99460 953 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 MXRA8Q9BRK3 442 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 WRAP73Q9P2S5 460 aaPredicted RBP19.53■□□□□ 0.72
CCM2-209ENST00000477605 IPO5O00410 1097 aaKnown RBP19.52■□□□□ 0.72
CCM2-209ENST00000477605 PHF2O75151 1096 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 RTN2O75298 545 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 GZMAP12544 262 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 VAMP7P51809 220 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 TGFB2P61812 414 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 BYSLQ13895 437 aaKnown RBP19.52■□□□□ 0.72
CCM2-209ENST00000477605 EPC2Q52LR7 807 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 DAW1Q8N136 415 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 ZNF622Q969S3 477 aaKnown RBP eCLIP19.52■□□□□ 0.72
CCM2-209ENST00000477605 HOOK2Q96ED9 719 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 TIPINQ9BVW5 301 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 PABPC3Q9H361 631 aaKnown RBP19.52■□□□□ 0.72
CCM2-209ENST00000477605 ST6GALNAC4Q9H4F1 302 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 PPANQ9NQ55 473 aaKnown RBP19.52■□□□□ 0.72
CCM2-209ENST00000477605 SEPT11Q9NVA2 429 aaKnown RBP19.52■□□□□ 0.72
CCM2-209ENST00000477605 BCCIPQ9P287 314 aaKnown RBP eCLIP19.52■□□□□ 0.72
CCM2-209ENST00000477605 PCYOX1Q9UHG3 505 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 COG5Q9UP83 839 aa19.52■□□□□ 0.72
CCM2-209ENST00000477605 ARP10275 920 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 PADI6Q6TGC4 694 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 JAMLQ86YT9 394 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 PROCA1Q8NCQ7 364 aaPredicted RBP19.52■□□□□ 0.71
CCM2-209ENST00000477605 SLC17A8Q8NDX2 589 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 P3H4Q92791 437 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 KAT2BQ92831 832 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 PGM2Q96G03 612 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 IWS1Q96ST2 819 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 TRIM51Q9BSJ1 452 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 WNT8AQ9H1J5 351 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 ACTR5Q9H9F9 607 aaPredicted RBP19.52■□□□□ 0.71
CCM2-209ENST00000477605 UBE2TQ9NPD8 197 aaPredicted RBP19.52■□□□□ 0.71
CCM2-209ENST00000477605 TAS2R14Q9NYV8 317 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 TMOD2Q9NZR1 351 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 CNOT7Q9UIV1 285 aaKnown RBP19.52■□□□□ 0.71
CCM2-209ENST00000477605 NR2E1Q9Y466 385 aa19.52■□□□□ 0.71
CCM2-209ENST00000477605 CCDC169A6NNP5 214 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 K7ENM7 598 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 KIAA0391O15091 583 aaKnown RBP19.51■□□□□ 0.71
CCM2-209ENST00000477605 GRIN3BO60391 1043 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 FTLP02792 175 aaPredicted RBP19.51■□□□□ 0.71
CCM2-209ENST00000477605 P4HBP07237 508 aaKnown RBP19.51■□□□□ 0.71
CCM2-209ENST00000477605 ECE1P42892 770 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 TNIP1Q15025 636 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 ALG3Q92685 438 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 CEP89Q96ST8 783 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 CTTNBP2NLQ9P2B4 639 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 FEM1BQ9UK73 627 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 CAPN7Q9Y6W3 813 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 EMSYQ7Z589 1322 aa19.51■□□□□ 0.71
CCM2-209ENST00000477605 LYPLA2O95372 231 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 CTNNA2P26232 953 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 PTGIRP43119 386 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 PMS2P54278 862 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 MAGOHP61326 146 aaKnown RBP19.5■□□□□ 0.71
CCM2-209ENST00000477605 CCDC174Q6PII3 467 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 MAGOHBQ96A72 148 aaKnown RBP19.5■□□□□ 0.71
CCM2-209ENST00000477605 PRMT6Q96LA8 375 aaPredicted RBP19.5■□□□□ 0.71
CCM2-209ENST00000477605 ZSWIM1Q9BR11 485 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 ATP8A1Q9Y2Q0 1164 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 HNRNPH1P31943 449 aaKnown RBP19.5■□□□□ 0.71
CCM2-209ENST00000477605 ACTN3Q08043 901 aaPredicted RBP19.5■□□□□ 0.71
CCM2-209ENST00000477605 MIER3Q7Z3K6 550 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 TAX1BP1Q86VP1 789 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 XXYLT1Q8NBI6 393 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 ACER1Q8TDN7 264 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 TMEM109Q9BVC6 243 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 VCPKMTQ9H867 229 aa19.5■□□□□ 0.71
CCM2-209ENST00000477605 PLS3P13797 630 aa19.49■□□□□ 0.71
CCM2-209ENST00000477605 SWT1Q5T5J6 900 aaKnown RBP19.49■□□□□ 0.71
CCM2-209ENST00000477605 SLC30A10Q6XR72 485 aa19.49■□□□□ 0.71
CCM2-209ENST00000477605 PALB2Q86YC2 1186 aa19.49■□□□□ 0.71
CCM2-209ENST00000477605 RAPGEF5Q92565 580 aa19.49■□□□□ 0.71
CCM2-209ENST00000477605 CNOT8Q9UFF9 292 aaKnown RBP19.49■□□□□ 0.71
CCM2-209ENST00000477605 MTRF1LQ9UGC7 380 aaKnown RBP19.49■□□□□ 0.71
CCM2-209ENST00000477605 DDX20Q9UHI6 824 aaKnown RBP19.49■□□□□ 0.71
CCM2-209ENST00000477605 ZNF536O15090 1300 aa19.49■□□□□ 0.71
CCM2-209ENST00000477605 H0YHG0 523 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms