RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 LIG1P18858 919 aa19.54■□□□□ 0.72
PTPN7-209ENST00000477554 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
PTPN7-209ENST00000477554 HYIQ5T013 277 aa19.54■□□□□ 0.72
PTPN7-209ENST00000477554 CDCA2Q69YH5 1023 aaPredicted RBP19.54■□□□□ 0.72
PTPN7-209ENST00000477554 RINT1Q6NUQ1 792 aa19.54■□□□□ 0.72
PTPN7-209ENST00000477554 MCPH1Q8NEM0 835 aa19.54■□□□□ 0.72
PTPN7-209ENST00000477554 BCL7CQ8WUZ0 217 aaPredicted RBP19.54■□□□□ 0.72
PTPN7-209ENST00000477554 POF1BQ8WVV4 589 aa19.54■□□□□ 0.72
PTPN7-209ENST00000477554 CLIC6Q96NY7 704 aa19.54■□□□□ 0.72
PTPN7-209ENST00000477554 SFI1A8K8P3 1242 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 LINC01565O15544 149 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 HIP1RO75146 1068 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 EOMESO95936 686 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 MUTP22033 750 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 ERVFC1P60507 584 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 TFDP1Q14186 410 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 TMEM119Q4V9L6 283 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 ARL6IP4Q66PJ3 421 aaKnown RBP19.53■□□□□ 0.72
PTPN7-209ENST00000477554 C1orf186Q6ZWK4 172 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 ZNF280BQ86YH2 543 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 NECAB3Q96P71 396 aaPredicted RBP19.53■□□□□ 0.72
PTPN7-209ENST00000477554 USP28Q96RU2 1077 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 PLVAPQ9BX97 442 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 CCDC113Q9H0I3 377 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 NXF3Q9H4D5 531 aaKnown RBP19.53■□□□□ 0.72
PTPN7-209ENST00000477554 MIOSQ9NXC5 875 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 DNAJB4Q9UDY4 337 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 IPPQ9Y573 584 aa19.53■□□□□ 0.72
PTPN7-209ENST00000477554 ZNF623O75123 536 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 FGF18O76093 207 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 ERLIN2O94905 339 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 RBM10P98175 930 aaKnown RBP19.52■□□□□ 0.72
PTPN7-209ENST00000477554 POU5F1BQ06416 359 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 HYAL1Q12794 435 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 KARSQ15046 597 aaKnown RBP19.52■□□□□ 0.72
PTPN7-209ENST00000477554 KCNT2Q6UVM3 1135 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 MRPL10Q7Z7H8 261 aaKnown RBP19.52■□□□□ 0.72
PTPN7-209ENST00000477554 CABP7Q86V35 215 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 P2RX5Q93086 422 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 EPSTI1Q96J88 318 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 ASB2Q96Q27 587 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 APOL6Q9BWW8 343 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 NFKBIZQ9BYH8 718 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 RAB34Q9BZG1 259 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 TBC1D13Q9NVG8 400 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 FBXO2Q9UK22 296 aaPredicted RBP19.52■□□□□ 0.72
PTPN7-209ENST00000477554 DNM3Q9UQ16 869 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 RWDD3Q9Y3V2 267 aa19.52■□□□□ 0.72
PTPN7-209ENST00000477554 DLL1O00548 723 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 DDHD2O94830 711 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 NPTXRO95502 500 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 SSBP05455 408 aaKnown RBP eCLIP19.51■□□□□ 0.71
PTPN7-209ENST00000477554 SLC12A3P55017 1021 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 DLX2Q07687 328 aaPredicted RBP19.51■□□□□ 0.71
PTPN7-209ENST00000477554 FOXD4L6Q3SYB3 417 aaPredicted RBP19.51■□□□□ 0.71
PTPN7-209ENST00000477554 ARSHQ5FYA8 562 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 EEF1DP3Q658K8 133 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 FOXD4L3Q6VB84 417 aaPredicted RBP19.51■□□□□ 0.71
PTPN7-209ENST00000477554 TAS1R3Q7RTX0 852 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 THNSL1Q8IYQ7 743 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 ABI1Q8IZP0 508 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 LRRC43Q8N309 656 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 ZFP42Q96MM3 310 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 CSRNP2Q9H175 543 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 FZD8Q9H461 694 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 NSUN3Q9H649 340 aaKnown RBP19.51■□□□□ 0.71
PTPN7-209ENST00000477554 NRDE2Q9H7Z3 1164 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 BLOC1S4Q9NUP1 217 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 F8W810 466 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 AKAP5P24588 427 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 BCAR1P56945 870 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 PTPROQ16827 1216 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 NOTUMQ6P988 496 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 CHAMP1Q96JM3 812 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 GBP3Q9H0R5 595 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 PDZD7Q9H5P4 517 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 IGFLR1Q9H665 355 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 CACNG4Q9UBN1 327 aa19.51■□□□□ 0.71
PTPN7-209ENST00000477554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.5■□□□□ 0.71
PTPN7-209ENST00000477554 A0A1B0GUA9 196 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 H3BQ06 376 aaPredicted RBP19.5■□□□□ 0.71
PTPN7-209ENST00000477554 ZC3H11AO75152 810 aaKnown RBP eCLIP19.5■□□□□ 0.71
PTPN7-209ENST00000477554 POMCP01189 267 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 PLA2G4BP0C869 781 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 PLCG1P19174 1290 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 NCLP19338 710 aaKnown RBP19.5■□□□□ 0.71
PTPN7-209ENST00000477554 LTBRP36941 435 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 NPTX2P47972 431 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 PEX3P56589 373 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
PTPN7-209ENST00000477554 NOMO2Q5JPE7 1267 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 NT5DC1Q5TFE4 455 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 RBM23Q86U06 439 aaKnown RBP19.5■□□□□ 0.71
PTPN7-209ENST00000477554 HLA-CQ95604 372 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 GAD1Q99259 594 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 VN1R3Q9BXE9 311 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 UBE2ZQ9H832 354 aaPredicted RBP19.5■□□□□ 0.71
PTPN7-209ENST00000477554 RSAD1Q9HA92 442 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 KLK14Q9P0G3 267 aa19.5■□□□□ 0.71
PTPN7-209ENST00000477554 PCDHB12Q9Y5F1 795 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms