RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 EFNA5P52803 228 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 FPGSQ05932 587 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 EHHADHQ08426 723 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 NFKBIBQ15653 356 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 HAUS6Q7Z4H7 955 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 DEFB128Q7Z7B8 93 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 TMEM161BQ8NDZ6 487 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 FIZ1Q96SL8 496 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 IFIH1Q9BYX4 1025 aaKnown RBP16.87■□□□□ 0.29
SEC13-215ENST00000477547 OSBPL7Q9BZF2 842 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 CCDC113Q9H0I3 377 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 AGO3Q9H9G7 860 aaKnown RBP16.87■□□□□ 0.29
SEC13-215ENST00000477547 RMND1Q9NWS8 449 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 PCDHA5Q9Y5H7 936 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 SQORQ9Y6N5 450 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 RALGAPA2Q2PPJ7 1873 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 MAPTP10636 758 aaKnown RBP16.86■□□□□ 0.29
SEC13-215ENST00000477547 CASP5P51878 434 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 SMAD3P84022 425 aaKnown RBP16.86■□□□□ 0.29
SEC13-215ENST00000477547 KCNB1Q14721 858 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 MAPK6Q16659 721 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 KLHL40Q2TBA0 621 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 CCDC183Q5T5S1 534 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 FGFBP2Q9BYJ0 223 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 ERVK-5Q9HDB9 667 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 PRMT7Q9NVM4 692 aaPredicted RBP16.86■□□□□ 0.29
SEC13-215ENST00000477547 CITO14578 2027 aa16.86■□□□□ 0.29
SEC13-215ENST00000477547 CNTNAP2Q9UHC6 1331 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 TNFRSF10AO00220 468 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 RHOBTB3O94955 611 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 CXCL10P02778 98 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 MYBP10242 640 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 NFX1Q12986 1120 aaKnown RBP16.85■□□□□ 0.29
SEC13-215ENST00000477547 STRN3Q13033 797 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 PPIGQ13427 754 aaKnown RBP eCLIP16.85■□□□□ 0.29
SEC13-215ENST00000477547 ALCAMQ13740 583 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 GPNMBQ14956 572 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 CAVIN1Q6NZI2 390 aaKnown RBP16.85■□□□□ 0.29
SEC13-215ENST00000477547 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 STXBP4Q6ZWJ1 553 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 GLIS3Q8NEA6 775 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 SEPT8Q92599 483 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
SEC13-215ENST00000477547 HVCN1Q96D96 273 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 GSDMAQ96QA5 445 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 NTPCRQ9BSD7 190 aaKnown RBP16.85■□□□□ 0.29
SEC13-215ENST00000477547 ST6GALNAC4Q9H4F1 302 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 PADI3Q9ULW8 664 aa16.85■□□□□ 0.29
SEC13-215ENST00000477547 UBE4BO95155 1302 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 K7ERI5 159 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 GPR182O15218 404 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 TSPAN1O60635 241 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 PPP1R37O75864 691 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 PFKMP08237 780 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 SCP2P22307 547 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 ABCD1P33897 745 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 PCBP1Q15365 356 aaKnown RBP eCLIP16.84■□□□□ 0.29
SEC13-215ENST00000477547 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 ZC2HC1CQ53FD0 456 aaPredicted RBP16.84■□□□□ 0.29
SEC13-215ENST00000477547 PLEKHG4Q58EX7 1191 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 TJAP1Q5JTD0 557 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 TAS1R3Q7RTX0 852 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 KIAA0895Q8NCT3 520 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 SPATA20Q8TB22 786 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 PRIMPOLQ96LW4 560 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 TMEM134Q9H6X4 195 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 SLC39A2Q9NP94 309 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 AGPAT5Q9NUQ2 364 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 TMEM63CQ9P1W3 806 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 MAN1B1Q9UKM7 699 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 ST3GAL5Q9UNP4 418 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 PIN4Q9Y237 131 aaKnown RBP16.84■□□□□ 0.29
SEC13-215ENST00000477547 GBF1Q92538 1859 aa16.84■□□□□ 0.29
SEC13-215ENST00000477547 BIN1O00499 593 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 EIF3DO15371 548 aaKnown RBP eCLIP16.83■□□□□ 0.28
SEC13-215ENST00000477547 B4GALT5O43286 388 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 EDN1P05305 212 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 GTF2BQ00403 316 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 PSMD2Q13200 908 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 PRPF4BQ13523 1007 aaKnown RBP16.83■□□□□ 0.28
SEC13-215ENST00000477547 AMHR2Q16671 573 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 FAM187BQ17R55 369 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 NT5DC1Q5TFE4 455 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 CNKSR3Q6P9H4 555 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 ZNF720Q7Z2F6 126 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 MAP4K3Q8IVH8 894 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 DBF4BQ8NFT6 615 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 APBB2Q92870 758 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 KCNN1Q92952 543 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 BICD1Q96G01 975 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 MRPL4Q9BYD3 311 aaKnown RBP16.83■□□□□ 0.28
SEC13-215ENST00000477547 FZD8Q9H461 694 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 IL23AQ9NPF7 189 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 KIAA1468Q9P260 1216 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 TBX20Q9UMR3 447 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 GDAQ9Y2T3 454 aa16.83■□□□□ 0.28
SEC13-215ENST00000477547 PDCD11Q14690 1871 aaKnown RBP16.83■□□□□ 0.28
SEC13-215ENST00000477547 ANK1P16157 1881 aa16.82■□□□□ 0.28
SEC13-215ENST00000477547 TRIP11Q15643 1979 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms