RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 WDR81Q562E7 1941 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 LOC400499M0QZD8 3231 aa11.02□□□□□ -0.64
COL4A5-204ENST00000477429 IGKV6-21A0A0C4DH24 114 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 C2CD2LO14523 706 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 CHMP2AO43633 222 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 EFEMP2O95967 443 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 LMNAP02545 664 aaKnown RBP11.02□□□□□ -0.65
COL4A5-204ENST00000477429 SP9P0CG40 484 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 CPA1P15085 419 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 RTN1Q16799 776 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 UBXN11Q5T124 520 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 FAM43BQ6ZT52 329 aaPredicted RBP11.02□□□□□ -0.65
COL4A5-204ENST00000477429 OTOP3Q7RTS5 596 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 KCNG4Q8TDN1 519 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 GPR152Q8TDT2 470 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 B3GALT6Q96L58 329 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 RTP3Q9BQQ7 232 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 ESYT1Q9BSJ8 1104 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 FOXQ1Q9C009 403 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 MINDY3Q9H8M7 445 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 TBC1D17Q9HA65 648 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 DISC1Q9NRI5 854 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 TBC1D22BQ9NU19 505 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 FAM105AQ9NUU6 356 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 SAMM50Q9Y512 469 aa11.02□□□□□ -0.65
COL4A5-204ENST00000477429 TEP1Q99973 2627 aaKnown RBP11.02□□□□□ -0.65
COL4A5-204ENST00000477429 CACNA1IQ9P0X4 2223 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 MYH9P35579 1960 aaKnown RBP11.01□□□□□ -0.65
COL4A5-204ENST00000477429 DOCK8Q8NF50 2099 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 DCDC2BA2VCK2 349 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 KLRC2P26717 231 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 CIITAP33076 1130 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 AAMPQ13685 434 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 PFKFB3Q16875 520 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-204ENST00000477429 MTERF2Q49AM1 385 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 SMAP1Q8IYB5 467 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-204ENST00000477429 SUMF1Q8NBK3 374 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 SPDYE1Q8NFV5 336 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-204ENST00000477429 SCLT1Q96NL6 688 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 TRAIPQ9BWF2 469 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 MRPL9Q9BYD2 267 aaKnown RBP11.01□□□□□ -0.65
COL4A5-204ENST00000477429 ZMYND12Q9H0C1 365 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 MAN1C1Q9NR34 630 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 MIOSQ9NXC5 875 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 PIN4Q9Y237 131 aaKnown RBP11.01□□□□□ -0.65
COL4A5-204ENST00000477429 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
COL4A5-204ENST00000477429 KLF18A0A0U1RQI7 1052 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 CCDC195A0A1B0GUA6 201 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 GOLGA8AA7E2F4 631 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 GOLGA8BA8MQT2 603 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 NRP1O14786 923 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 TEX28O15482 410 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 POMCP01189 267 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 HOXA11P31270 313 aaPredicted RBP11□□□□□ -0.65
COL4A5-204ENST00000477429 DMWDQ09019 674 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 PLA2G4FQ68DD2 849 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 TWF2Q6IBS0 349 aaKnown RBP11□□□□□ -0.65
COL4A5-204ENST00000477429 B3GNT9Q6UX72 402 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 RNF168Q8IYW5 571 aaPredicted RBP11□□□□□ -0.65
COL4A5-204ENST00000477429 SLC5A5Q92911 643 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 ACSF2Q96CM8 615 aaPredicted RBP11□□□□□ -0.65
COL4A5-204ENST00000477429 IFT122Q9HBG6 1241 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 WDR6Q9NNW5 1121 aaKnown RBP11□□□□□ -0.65
COL4A5-204ENST00000477429 CHST12Q9NRB3 414 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 RBM28Q9NW13 759 aaKnown RBP11□□□□□ -0.65
COL4A5-204ENST00000477429 WNT16Q9UBV4 365 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 CEP131Q9UPN4 1083 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 MTF2Q9Y483 593 aaPredicted RBP11□□□□□ -0.65
COL4A5-204ENST00000477429 PCDHB2Q9Y5E7 798 aa11□□□□□ -0.65
COL4A5-204ENST00000477429 DOCK6Q96HP0 2047 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 TENM4Q6N022 2769 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 WDR64B1ANS9 1081 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 INPPL1O15357 1258 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 ZBTB43O43298 467 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 ZNF623O75123 536 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 PSMD10O75832 226 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 TMOD1P28289 359 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 GBP2P32456 591 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 RNASELQ05823 741 aaKnown RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 TBC1D8BQ0IIM8 1120 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 POTEHQ6S545 545 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 GLB1LQ6UWU2 654 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 C15orf39Q6ZRI6 1047 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 ANO5Q75V66 913 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 RHPN2Q8IUC4 686 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 SMG8Q8ND04 991 aaKnown RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 CMASQ8NFW8 434 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 RABGGTAQ92696 567 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 PHKBQ93100 1093 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 FAM167AQ96KS9 214 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 NLRP4Q96MN2 994 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 NIFKQ9BYG3 293 aaKnown RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 GCOM2Q9BZD3 368 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 NRBP2Q9NSY0 501 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 RYDENQ9NUL5 291 aaKnown RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 DACT1Q9NYF0 836 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 IGSF9Q9P2J2 1179 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 SUCLA2Q9P2R7 463 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 WRAP73Q9P2S5 460 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 EPS15L1Q9UBC2 864 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms