RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 SYNDIG1Q9H7V2 258 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 CUL1Q13616 776 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 MORF4L2Q15014 288 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 THEMIS2Q5TEJ8 643 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 RPAP1Q9BWH6 1393 aaPredicted RBP19.75■□□□□ 0.75
VARS2-209ENST00000477288 UBA6A0AVT1 1052 aaPredicted RBP19.75■□□□□ 0.75
VARS2-209ENST00000477288 ZRANB2O95218 330 aaKnown RBP eCLIP19.75■□□□□ 0.754e-7■■■■□ 25.5
VARS2-209ENST00000477288 MMEP08473 750 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 RESTQ13127 1097 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 RAET1EQ8TD07 263 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 C16orf87Q6PH81 154 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 SLC44A5Q8NCS7 719 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 SIK2Q9H0K1 926 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 ZC4H2Q9NQZ6 224 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 AFF2P51816 1311 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 VEPH1Q14D04 833 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 CC2D1AQ6P1N0 951 aaPredicted RBP19.75■□□□□ 0.75
VARS2-209ENST00000477288 TTC13Q8NBP0 860 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 RNF25Q96BH1 459 aaPredicted RBP19.75■□□□□ 0.75
VARS2-209ENST00000477288 ADA2Q9NZK5 511 aa19.75■□□□□ 0.75
VARS2-209ENST00000477288 A8MXQ7 604 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 KRT38O76015 456 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 CASP8Q14790 479 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 EPM2AIP1Q7L775 607 aaPredicted RBP19.74■□□□□ 0.75
VARS2-209ENST00000477288 PANX2Q96RD6 677 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 MRPL4Q9BYD3 311 aaKnown RBP19.74■□□□□ 0.75
VARS2-209ENST00000477288 CTIFO43310 598 aaKnown RBP19.74■□□□□ 0.75
VARS2-209ENST00000477288 DNAJC6O75061 913 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 GPC5P78333 572 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 CEP95Q96GE4 821 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 BTBD6Q96KE9 485 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 EPAS1Q99814 870 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 ZFP69BQ9UJL9 534 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 PSMC1P62191 440 aaKnown RBP19.74■□□□□ 0.75
VARS2-209ENST00000477288 CYFIP1Q7L576 1253 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 NARFQ9UHQ1 456 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 KCNH4Q9UQ05 1017 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 UTYO14607 1347 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 POTEB3A0JP26 581 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 TRIM49BA6NDI0 452 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 POTECB2RU33 542 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 SFNP31947 248 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 PFKFB3Q16875 520 aaPredicted RBP19.74■□□□□ 0.75
VARS2-209ENST00000477288 C1orf146Q5VVC0 180 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 GRAMD4Q6IC98 578 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 POTEBQ6S5H4 581 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 PODNQ7Z5L7 613 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 ZFYVE19Q96K21 471 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 ACAD9Q9H845 621 aa19.74■□□□□ 0.75
VARS2-209ENST00000477288 TSPOAP1O95153 1857 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 AARSP49588 968 aaKnown RBP eCLIP19.73■□□□□ 0.75
VARS2-209ENST00000477288 EFTUD2Q15029 972 aaKnown RBP eCLIP19.73■□□□□ 0.758e-7■■■■■ 32.1
VARS2-209ENST00000477288 SLFNL1Q499Z3 407 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 EFHC2Q5JST6 749 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 KRT39Q6A163 491 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 ZC3H15Q8WU90 426 aaKnown RBP19.73■□□□□ 0.75
VARS2-209ENST00000477288 MLXIPLQ9NP71 852 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 ADCY10Q96PN6 1610 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 DIAPH2O60879 1101 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 GNA15P30679 374 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 SAAL1Q96ER3 474 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 CEP72Q9P209 647 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 STX18Q9P2W9 335 aaKnown RBP19.73■□□□□ 0.75
VARS2-209ENST00000477288 PODXLO00592 558 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 VAMP7P51809 220 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 COASYQ13057 564 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 TBC1D10CQ8IV04 446 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 KIF12Q96FN5 646 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 CYP26B1Q9NR63 512 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 A0A087WUV0 522 aaPredicted RBP19.73■□□□□ 0.75
VARS2-209ENST00000477288 SSTR3P32745 418 aaPredicted RBP19.73■□□□□ 0.75
VARS2-209ENST00000477288 STAT3P40763 770 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 QARSP47897 775 aaKnown RBP19.73■□□□□ 0.75
VARS2-209ENST00000477288 TMEM60Q9H2L4 133 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 DIS3Q9Y2L1 958 aaKnown RBP19.73■□□□□ 0.75
VARS2-209ENST00000477288 DFFAO00273 331 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 P4HBP07237 508 aaKnown RBP19.73■□□□□ 0.75
VARS2-209ENST00000477288 BTBD8Q5XKL5 378 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 PPM1NQ8N819 430 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 TRPC7Q9HCX4 862 aa19.73■□□□□ 0.75
VARS2-209ENST00000477288 SNAP23O00161 211 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 SRGAP2O75044 1071 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 DEUP1Q05D60 604 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 ASPSCR1Q9BZE9 553 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 RNF103-CHMP3A0A140T963 221 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 H7C1W4 665 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 TBXAS1P24557 533 aaPredicted RBP19.72■□□□□ 0.75
VARS2-209ENST00000477288 SMARCA1P28370 1054 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 HEATR6Q6AI08 1181 aaKnown RBP19.72■□□□□ 0.75
VARS2-209ENST00000477288 CATSPER3Q86XQ3 398 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 DDIASQ8IXT1 998 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 NUP85Q9BW27 656 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 COL15A1P39059 1388 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 RESP18Q5W5W9 173 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 DDX53Q86TM3 631 aaKnown RBP19.72■□□□□ 0.75
VARS2-209ENST00000477288 GAS2L3Q86XJ1 694 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 ABHD8Q96I13 439 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 TRIM33Q9UPN9 1127 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 RALAP11233 206 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 LCP1P13796 627 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms