RNA–Protein interactions for RNA: ENST00000477120.1

PSMD1-209, Transcript of proteasome 26S subunit, non-ATPase 1, human

TSL 2

Gene PSMD1, Length 723 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD1-209	ENST00000477120	PRPF6	O94906	941 aa	Known RBP	4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	CD38	P28907	300 aa		4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	ZEB1	P37275	1124 aa	Predicted RBP	4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	COLEC12	Q5KU26	742 aa		4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	SOGA3	Q5TF21	947 aa		4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120		Q6YL49	198 aa		4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	BEND2	Q8NDZ0	799 aa		4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	SRPK1	Q96SB4	655 aa	Known RBP	4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	DCLRE1C	Q96SD1	692 aa	Known RBP	4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	NOL10	Q9BSC4	688 aa	Known RBP	4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	NDC1	Q9BTX1	674 aa		4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	ZNF768	Q9H5H4	540 aa	Known RBP	4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	ING3	Q9NXR8	418 aa		4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	EIF2B4	Q9UI10	523 aa	Known RBP	4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	COX11	Q9Y6N1	276 aa		4.15	□□□□□ -1.75
PSMD1-209	ENST00000477120	CBX4	O00257	560 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	ALDH1A2	O94788	518 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	USP14	P54578	494 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	MRPL49	Q13405	166 aa	Known RBP	4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	CSRP2	Q16527	193 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	FAM214A	Q32MH5	1076 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	CREB3L3	Q68CJ9	461 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	ARHGEF19	Q8IW93	802 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	PIK3C3	Q8NEB9	887 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	COQ10A	Q96MF6	247 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	CLUHP3	Q96NS8	147 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	ELF4	Q99607	663 aa	Predicted RBP	4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	MYL10	Q9BUA6	226 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	CPEB1	Q9BZB8	566 aa	Known RBP	4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	SERHL2	Q9H4I8	314 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	ADARB2	Q9NS39	739 aa	Known RBP	4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	DKK2	Q9UBU2	259 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	CLCA2	Q9UQC9	943 aa		4.14	□□□□□ -1.75
PSMD1-209	ENST00000477120	DIRC3	C9JPN6	131 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	RNASET2	O00584	256 aa	Known RBP	4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	KIAA0355	O15063	1070 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	OPA1	O60313	960 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	DNAJC8	O75937	253 aa	Predicted RBP	4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	RAPGEF3	O95398	923 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	SLC9A1	P19634	815 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	FLT3	P36888	993 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	BMPR1A	P36894	532 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	AVPR1B	P47901	424 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	UNQ6494/PRO21346	Q6UXR6	183 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	UBE2R2	Q712K3	238 aa	Predicted RBP	4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	SUPT20H	Q8NEM7	779 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	OR5M3	Q8NGP4	307 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	IL17RA	Q96F46	866 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	C8orf37	Q96NL8	207 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	ORAI3	Q9BRQ5	295 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	LSM14B	Q9BX40	385 aa	Known RBP	4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	POFUT1	Q9H488	388 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	SYBU	Q9NX95	663 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	CHST2	Q9Y4C5	530 aa		4.13	□□□□□ -1.75
PSMD1-209	ENST00000477120	APOL3	O95236	402 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	CFB	P00751	764 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	CLK3	P49761	638 aa	Known RBP	4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	GZMK	P49863	264 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	FAM189B	P81408	668 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	CD69	Q07108	199 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	LRRC32	Q14392	662 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	PIK3R6	Q5UE93	754 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	ZKSCAN2	Q63HK3	967 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	CCDC62	Q6P9F0	684 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	GPRIN1	Q7Z2K8	1008 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	GDF7	Q7Z4P5	450 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	LILRB2	Q8N423	598 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	EPC1	Q9H2F5	836 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	USP36	Q9P275	1121 aa	Known RBP	4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	PCDHB6	Q9Y5E3	794 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	MYPN	Q86TC9	1320 aa		4.12	□□□□□ -1.75
PSMD1-209	ENST00000477120	INO80B-WBP1	J3KQ70	363 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	LPXN	O60711	386 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	SEC24D	O94855	1032 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	LY86	O95711	162 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	TYRP1	P17643	537 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	CD40	P25942	277 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	APOBEC3A	P31941	199 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	CASR	P41180	1078 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	GPR15	P49685	360 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	PTTG1IP	P53801	180 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	BLOC1S1	P78537	153 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	ZNF460	Q14592	562 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	BEAN1	Q3B7T3	259 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	CCDC178	Q5BJE1	867 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	TAS1R1	Q7RTX1	841 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	PLXDC1	Q8IUK5	500 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	CDYL2	Q8N8U2	506 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	LINC00476	Q8WZB0	136 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	RTF1	Q92541	710 aa	Known RBP	4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	NAF1	Q96HR8	494 aa	Known RBP	4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	WDR11	Q9BZH6	1224 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	INO80B	Q9C086	356 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	ZMAT4	Q9H898	229 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	AKIP1	Q9NQ31	210 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	TOMM22	Q9NS69	142 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms