RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 GINM1Q9NU53 330 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 CAPN11Q9UMQ6 739 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 TNFSF13BQ9Y275 285 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 SLC30A1Q9Y6M5 507 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 NUP160Q12769 1436 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 UBE4BO95155 1302 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 CYP2D7A0A087X1C5 515 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 TBKBP1A7MCY6 615 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 H0YC42 278 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 PDIA6Q15084 440 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 DGKDQ16760 1214 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 ANKRD20A4Q4UJ75 823 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 ANKRD20A8PQ5CZ79 823 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 ANKRD20A2Q5SQ80 823 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 ANKRD20A1Q5TYW2 823 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 HLA-DQA1Q5Y7H0 255 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 TBC1D9BQ66K14 1250 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 CROCCP2Q86T23 111 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 TRIM42Q8IWZ5 723 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 TRIML2Q8N7C3 387 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 MAGOHBQ96A72 148 aaKnown RBP7.11□□□□□ -1.27
TTC3-215ENST00000476784 SLITRK1Q96PX8 696 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 PASKQ96RG2 1323 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 SLC16A4O15374 487 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 GPR1P46091 355 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 SULT1E1P49888 294 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 MARSP56192 900 aaKnown RBP7.11□□□□□ -1.27
TTC3-215ENST00000476784 APBA1Q02410 837 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 MTMR3Q13615 1198 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 SYMPKQ92797 1274 aaKnown RBP7.11□□□□□ -1.27
TTC3-215ENST00000476784 CENPTQ96BT3 561 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 PRRG4Q9BZD6 226 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 NDE1Q9NXR1 346 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 PCSK1NQ9UHG2 260 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 CCDC151A5D8V7 595 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 TLR2O60603 784 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 PRKAA1Q13131 559 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 LVRNQ6Q4G3 990 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 KLHL25Q9H0H3 589 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 GCNT4Q9P109 453 aa7.11□□□□□ -1.27
TTC3-215ENST00000476784 AFPP02771 609 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 CYP2C9P11712 490 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 HMOX2P30519 316 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 EPHB3P54753 998 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 TRIM68Q6AZZ1 485 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 FAM47EQ6ZV65 393 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 SMIM5Q71RC9 77 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 CYP4X1Q8N118 509 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 LARP4BQ92615 738 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 ATXN7L3BQ96GX2 97 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 CNPPD1Q9BV87 410 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 BACH2Q9BYV9 841 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 PUS3Q9BZE2 481 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 Q9H521 79 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 DHX35Q9H5Z1 703 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 PLEKHA5Q9HAU0 1116 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 KLHL11Q9NVR0 708 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 STK17AQ9UEE5 414 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 VTI1BQ9UEU0 232 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 TBK1Q9UHD2 729 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 PCDHB6Q9Y5E3 794 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 CCDC78A2IDD5 438 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 DIAPH2O60879 1101 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 RPS6KA4O75676 772 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 H2AFZP0C0S5 128 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 YWHAZP63104 245 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 MTX1Q13505 466 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 SLC45A4Q5BKX6 768 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 H2AFVQ71UI9 128 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 DCP1BQ8IZD4 617 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 HASPINQ8TF76 798 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 POLD4Q9HCU8 107 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 HMX1Q9NP08 348 aaPredicted RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 H2AFY2Q9P0M6 372 aaPredicted RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 SPASTQ9UBP0 616 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 PCDHA6Q9UN73 950 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 NFE2L3Q9Y4A8 694 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 PCDHA8Q9Y5H6 950 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 USP19O94966 1318 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 NDUFAB1O14561 156 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 ATP9BO43861 1147 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 HSPA4LO95757 839 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 ASS1P00966 412 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 GSNP06396 782 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 CDC16Q13042 620 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 DEFB115Q30KQ5 88 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 SGO1Q5FBB7 561 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 PTRHD1Q6GMV3 140 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 GALNT17Q6IS24 598 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 ANKRD13AQ8IZ07 590 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 CCNYL1Q8N7R7 359 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 POMGNT2Q8NAT1 580 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 CERS4Q9HA82 394 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 UTP6Q9NYH9 597 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 RPS6KB2Q9UBS0 482 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 SBNO1A3KN83 1393 aa7.1□□□□□ -1.27
TTC3-215ENST00000476784 DNAJC8O75937 253 aaPredicted RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 ZRANB2O95218 330 aaKnown RBP eCLIP7.1□□□□□ -1.27
TTC3-215ENST00000476784 RPN1P04843 607 aaKnown RBP7.1□□□□□ -1.27
TTC3-215ENST00000476784 CHMLP26374 656 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms