RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 DNERQ8NFT8 737 aa4.39□□□□□ -1.71
NPHP3-207ENST00000476742 TGFBRAP1Q8WUH2 860 aa4.39□□□□□ -1.71
NPHP3-207ENST00000476742 AUTS2Q8WXX7 1259 aa4.39□□□□□ -1.71
NPHP3-207ENST00000476742 FAM89AQ96GI7 184 aa4.39□□□□□ -1.71
NPHP3-207ENST00000476742 CDK5RAP1Q96SZ6 601 aaKnown RBP4.39□□□□□ -1.71
NPHP3-207ENST00000476742 VTA1Q9NP79 307 aa4.39□□□□□ -1.71
NPHP3-207ENST00000476742 NCDNQ9UBB6 729 aa4.39□□□□□ -1.71
NPHP3-207ENST00000476742 EVLQ9UI08 416 aaPredicted RBP4.39□□□□□ -1.71
NPHP3-207ENST00000476742 ST6GALNAC2Q9UJ37 374 aa4.39□□□□□ -1.71
NPHP3-207ENST00000476742 EDARQ9UNE0 448 aa4.39□□□□□ -1.71
NPHP3-207ENST00000476742 SLC30A1Q9Y6M5 507 aa4.39□□□□□ -1.71
NPHP3-207ENST00000476742 K7ESF4 209 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 FOXS1O43638 330 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 ALDH1A2O94788 518 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 NCLP19338 710 aaKnown RBP4.38□□□□□ -1.71
NPHP3-207ENST00000476742 COMTP21964 271 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 NPEPPSP55786 919 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 MEF2AQ02078 507 aaPredicted RBP4.38□□□□□ -1.71
NPHP3-207ENST00000476742 TAS1R1Q7RTX1 841 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 ADGRE4PQ86SQ3 457 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 LYSMD2Q8IV50 215 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 AMOTL1Q8IY63 956 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 GPR135Q8IZ08 494 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 CMTM4Q8IZR5 234 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 Q8TCH9 128 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 COG1Q8WTW3 980 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 DVL3Q92997 716 aaPredicted RBP4.38□□□□□ -1.71
NPHP3-207ENST00000476742 ARL8AQ96BM9 186 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 C8orf49Q96NF6 230 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 MPHOSPH9Q99550 1183 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 TCF25Q9BQ70 676 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 BRINP2Q9C0B6 783 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 QRSL1Q9H0R6 528 aaKnown RBP4.38□□□□□ -1.71
NPHP3-207ENST00000476742 PCDH12Q9NPG4 1184 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 DNAJC28Q9NX36 388 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 PLA2G3Q9NZ20 509 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 DPP7Q9UHL4 492 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 ZBTB21Q9ULJ3 1066 aa4.38□□□□□ -1.71
NPHP3-207ENST00000476742 A0A1W2PR48 441 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 UBE2QL1A1L167 161 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 PRAMEF4O60810 478 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 LTA4HP09960 611 aaKnown RBP4.37□□□□□ -1.71
NPHP3-207ENST00000476742 MSX2P35548 267 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-207ENST00000476742 SELENOPP49908 381 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 SLC5A3P53794 718 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 WNT3AP56704 352 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 CDK17Q00537 523 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 DUSP8Q13202 625 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 KLF1Q13351 362 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-207ENST00000476742 ACAP1Q15027 740 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 GJC2Q5T442 439 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-207ENST00000476742 ZNF585AQ6P3V2 769 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 FAM111BQ6SJ93 734 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 SLC41A1Q8IVJ1 513 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 CMIPQ8IY22 773 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 D2HGDHQ8N465 521 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 PRPF38AQ8NAV1 312 aaKnown RBP4.37□□□□□ -1.71
NPHP3-207ENST00000476742 PIK3C3Q8NEB9 887 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 FATE1Q969F0 183 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 TMEM176AQ96HP8 235 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 ORAI2Q96SN7 254 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 GPHA2Q96T91 129 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 FDXACB1Q9BRP7 624 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-207ENST00000476742 CD248Q9HCU0 757 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 IL23AQ9NPF7 189 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 ING3Q9NXR8 418 aa4.37□□□□□ -1.71
NPHP3-207ENST00000476742 CYR61O00622 381 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 MUSKO15146 869 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 PHF2O75151 1096 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 CFBP00751 764 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 GDF5P43026 501 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 GPR3P46089 330 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 CDKN1CP49918 316 aaPredicted RBP4.36□□□□□ -1.71
NPHP3-207ENST00000476742 ERVK-21P61565 698 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 ADAM17P78536 824 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 DUSP2Q05923 314 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 ITKQ08881 620 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 FOXL1Q12952 345 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 SAFB2Q14151 953 aaKnown RBP eCLIP4.36□□□□□ -1.71
NPHP3-207ENST00000476742 FAM50AQ14320 339 aaKnown RBP4.36□□□□□ -1.71
NPHP3-207ENST00000476742 PRKD1Q15139 912 aaPredicted RBP4.36□□□□□ -1.71
NPHP3-207ENST00000476742 CLUL1Q15846 466 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 MUM1Q2TAK8 710 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 ANO4Q32M45 955 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 TOR2AQ5JU69 321 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 MFSD5Q6N075 450 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 SGMS1Q86VZ5 419 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 OR5M3Q8NGP4 307 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 EDAQ92838 391 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 MTMR8Q96EF0 704 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 KLC2Q9H0B6 622 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 EPC1Q9H2F5 836 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 PRDM12Q9H4Q4 367 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 AGO3Q9H9G7 860 aaKnown RBP4.36□□□□□ -1.71
NPHP3-207ENST00000476742 IFT122Q9HBG6 1241 aa4.36□□□□□ -1.71
NPHP3-207ENST00000476742 CCM2LQ9NUG4 571 aaPredicted RBP4.36□□□□□ -1.71
NPHP3-207ENST00000476742 NOP58Q9Y2X3 529 aaKnown RBP4.36□□□□□ -1.71
NPHP3-207ENST00000476742 hCG_2014768A0A024R1R8 64 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 CYP27B1O15528 508 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 GYPEP15421 78 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms