RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 TEX28O15482 410 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 RFPL2O75678 378 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 SOD2P04179 222 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 URODP06132 367 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 MYBP10242 640 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 ADD1P35611 737 aaKnown RBP18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 XKR3Q5GH77 459 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 TAS1R1Q7RTX1 841 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 MRPL10Q7Z7H8 261 aaKnown RBP18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 KSR1Q8IVT5 923 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 C1orf210Q8IVY1 113 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 SLC5A5Q92911 643 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 GJA10Q969M2 543 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 RPS6KC1Q96S38 1066 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 SH2D3AQ9BRG2 576 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 ANO2Q9NQ90 1003 aa18.49■□□□□ 0.55
APOBEC3F-203ENST00000476513 GLUD1P00367 558 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 ADH1AP07327 375 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 GNA11P29992 359 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 LRCH2Q5VUJ6 765 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 DHX32Q7L7V1 743 aaKnown RBP18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 CCDC12Q8WUD4 166 aaPredicted RBP18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 SMG7Q92540 1137 aaKnown RBP18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 ZNF707Q96C28 371 aaPredicted RBP18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 CCDC136Q96JN2 1154 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 NLRP4Q96MN2 994 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 FAM193BQ96PV7 902 aaPredicted RBP18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 HERC2P3Q9BVR0 1158 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 TEKT3Q9BXF9 490 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 RSAD1Q9HA92 442 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 ARHGEF3Q9NR81 526 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 AGPAT5Q9NUQ2 364 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 KANSL3Q9P2N6 904 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 EPG5Q9HCE0 2579 aa18.48■□□□□ 0.55
APOBEC3F-203ENST00000476513 RCAN1P53805 252 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 ELMSAN1Q6PJG2 1045 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 MIER3Q7Z3K6 550 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 SUMF1Q8NBK3 374 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 IFT122Q9HBG6 1241 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 RXFP1Q9HBX9 757 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 MARCH5Q9NX47 278 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 DPP7Q9UHL4 492 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 NAP1L2Q9ULW6 460 aaPredicted RBP18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 SSX2IPQ9Y2D8 614 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 PRG3Q9Y2Y8 225 aaPredicted RBP18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 TPRP12270 2363 aaKnown RBP18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 WDR87Q6ZQQ6 2873 aa18.47■□□□□ 0.55
APOBEC3F-203ENST00000476513 POTEMA6NI47 508 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 ANHXE9PGG2 379 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 MAFO75444 373 aaPredicted RBP18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 PSMD10O75832 226 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 PAPLNO95428 1278 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 POMCP01189 267 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 SPATA31D3P0C874 917 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 LAMP2P13473 410 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 GLULP15104 373 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 UBXN11Q5T124 520 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 RNF20Q5VTR2 975 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 KIAA0319Q5VV43 1072 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 DCLRE1AQ6PJP8 1040 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 POTEGQ6S5H5 508 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 SPATA31D4Q6ZUB0 917 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 RDM1Q8NG50 284 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 SLC2A4RGQ9NR83 387 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 WDR81Q562E7 1941 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 CNTNAP2Q9UHC6 1331 aa18.46■□□□□ 0.55
APOBEC3F-203ENST00000476513 DDX11L8A8MPP1 907 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 KRT37O76014 449 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 EFEMP2O95967 443 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 GLUD2P49448 558 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 USP11P51784 963 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 HTR4Q13639 388 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 RSPO4Q2I0M5 234 aaPredicted RBP18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 ADCK5Q3MIX3 580 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 RNF168Q8IYW5 571 aaPredicted RBP18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 MAML2Q8IZL2 1156 aaPredicted RBP18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 PJA1Q8NG27 643 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 BICD2Q8TD16 824 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 CNTNAP3BQ96NU0 1288 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 CNTNAP3Q9BZ76 1288 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 FOXQ1Q9C009 403 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 NT5C3AQ9H0P0 336 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 DMXL1Q9Y485 3027 aa18.45■□□□□ 0.54
APOBEC3F-203ENST00000476513 CCDC196A0A1B0GTZ2 297 aa18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 PRPF3O43395 683 aaKnown RBP18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 HOXA11P31270 313 aaPredicted RBP18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 OR1G1P47890 313 aa18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 B3GNT9Q6UX72 402 aa18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 ANO5Q75V66 913 aa18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 GET4Q7L5D6 327 aaPredicted RBP18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 COLGALT2Q8IYK4 626 aa18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 ST13P5Q8NFI4 369 aaPredicted RBP18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 HDAC7Q8WUI4 952 aa18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 PIDD1Q9HB75 910 aa18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 NUMBLQ9Y6R0 609 aa18.44■□□□□ 0.54
APOBEC3F-203ENST00000476513 DOCK8Q8NF50 2099 aa18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 LRRN2O75325 713 aa18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 NCLP19338 710 aaKnown RBP18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 STARD6P59095 220 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms