RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 TRPM7Q96QT4 1865 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 PLXNA1Q9UIW2 1896 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 GTPBP10A4D1E9 387 aaKnown RBP20.76■□□□□ 0.91
SYF2-204ENST00000476231 EXOC3O60645 756 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 RHOXF2BP0C7M4 288 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 TCP1P17987 556 aaKnown RBP20.76■□□□□ 0.91
SYF2-204ENST00000476231 ADORA2AP29274 412 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 VSNL1P62760 191 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 EMC2Q15006 297 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 CHADLQ6NUI6 762 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 MAP4K3Q8IVH8 894 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 BSNDQ8WZ55 320 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 PTPN18Q99952 460 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 RHOXF2Q9BQY4 288 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 DHX33Q9H6R0 707 aaKnown RBP20.76■□□□□ 0.91
SYF2-204ENST00000476231 AZI2Q9H6S1 392 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 TSKSQ9UJT2 592 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 PPME1Q9Y570 386 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 MACROD2A1Z1Q3 448 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 H0YCG3 227 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 RFC5P40937 340 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 HUNKP57058 714 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 TTLL4Q14679 1199 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 ARMCX2Q7L311 632 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 ZNF467Q7Z7K2 595 aaPredicted RBP20.76■□□□□ 0.91
SYF2-204ENST00000476231 DHX37Q8IY37 1157 aaKnown RBP20.76■□□□□ 0.91
SYF2-204ENST00000476231 SCFD2Q8WU76 684 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 FAM167AQ96KS9 214 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 GPR20Q99678 358 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 CRACR2AQ9BSW2 395 aa20.76■□□□□ 0.91
SYF2-204ENST00000476231 TFRCP02786 760 aaKnown RBP20.75■□□□□ 0.91
SYF2-204ENST00000476231 FAM110CQ1W6H9 321 aa20.75■□□□□ 0.91
SYF2-204ENST00000476231 MAP9Q49MG5 647 aa20.75■□□□□ 0.91
SYF2-204ENST00000476231 ZNF771Q7L3S4 317 aaPredicted RBP20.75■□□□□ 0.91
SYF2-204ENST00000476231 POLR3FQ9H1D9 316 aaPredicted RBP20.75■□□□□ 0.91
SYF2-204ENST00000476231 DIS3Q9Y2L1 958 aaKnown RBP20.75■□□□□ 0.91
SYF2-204ENST00000476231 DENND3A2RUS2 1198 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 NOP56O00567 594 aaKnown RBP20.74■□□□□ 0.91
SYF2-204ENST00000476231 MAPK13O15264 365 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 LGR5O75473 907 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 TXNP10599 105 aaKnown RBP20.74■□□□□ 0.91
SYF2-204ENST00000476231 SCP2P22307 547 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 SOX10P56693 466 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 TARBP2Q15633 366 aaKnown RBP20.74■□□□□ 0.91
SYF2-204ENST00000476231 EXOC3L4Q17RC7 722 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 GBP6Q6ZN66 633 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 MMGT1Q8N4V1 131 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 SLC7A3Q8WY07 619 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 CEP89Q96ST8 783 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 VIPAS39Q9H9C1 493 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 ST7Q9NRC1 585 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 FBXL5Q9UKA1 691 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 MCM3APO60318 1980 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 ANXA13P27216 316 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 OAS2P29728 719 aaKnown RBP20.74■□□□□ 0.91
SYF2-204ENST00000476231 C10orf76Q5T2E6 689 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 PLPPR4Q7Z2D5 763 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 XXYLT1Q8NBI6 393 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 GANQ9H2C0 597 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 VTA1Q9NP79 307 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 RNF14Q9UBS8 474 aa20.74■□□□□ 0.91
SYF2-204ENST00000476231 BZW2Q9Y6E2 419 aaKnown RBP20.74■□□□□ 0.91
SYF2-204ENST00000476231 ATP8B3O60423 1300 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 TLR2O60603 784 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 POLR2FP61218 127 aaKnown RBP20.73■□□□□ 0.91
SYF2-204ENST00000476231 HSDL1Q3SXM5 330 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 CCDC70Q6NSX1 233 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 GPR142Q7Z601 462 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 KCNN1Q92952 543 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 SPATA33Q96N06 139 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 NOX5Q96PH1 765 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 KIFC3Q9BVG8 833 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 ACBD3Q9H3P7 528 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 HSPBP1Q9NZL4 362 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 HYOU1Q9Y4L1 999 aa20.73■□□□□ 0.91
SYF2-204ENST00000476231 EMSYQ7Z589 1322 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 SRGAP2O75044 1071 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 KRT13P13646 458 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 MAPK4P31152 587 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 BFSP1Q12934 665 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 SLC18A3Q16572 532 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 INTS8Q75QN2 995 aaKnown RBP20.72■□□□□ 0.91
SYF2-204ENST00000476231 CREG2Q8IUH2 290 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 BBXQ8WY36 941 aaPredicted RBP20.72■□□□□ 0.91
SYF2-204ENST00000476231 CBWD1Q9BRT8 395 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 PCIF1Q9H4Z3 704 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 ARHGAP28Q9P2N2 729 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 CAPN6Q9Y6Q1 641 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 BTNL10A8MVZ5 291 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 TISP43B9A030 160 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 PON1P27169 355 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 ARL2P36404 184 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 GRB14Q14449 540 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 DPY19L2P1Q6NXN4 242 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 CAGE1Q8TC20 777 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 GLG1Q92896 1179 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 ZCCHC17Q9NP64 241 aaKnown RBP20.72■□□□□ 0.91
SYF2-204ENST00000476231 NLRC4Q9NPP4 1024 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 PDGFCQ9NRA1 345 aa20.72■□□□□ 0.91
SYF2-204ENST00000476231 ADGRA3Q8IWK6 1321 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms