RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 SAMD3Q8N6K7 520 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 TMEM161BQ8NDZ6 487 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 BSNDQ8WZ55 320 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 RFFLQ8WZ73 363 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 RUBCNQ92622 972 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 ATP6V0A1Q93050 837 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 GPRASP2Q96D09 838 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 RUFY1Q96T51 708 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 AGPAT1Q99943 283 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 TIPINQ9BVW5 301 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 TMEM117Q9H0C3 514 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 JPH1Q9HDC5 661 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-216ENST00000476142 TOPORSQ9NS56 1045 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-216ENST00000476142 CHORDC1Q9UHD1 332 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-216ENST00000476142 AMFRQ9UKV5 643 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 ZNF214Q9UL59 606 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-216ENST00000476142 INTUQ9ULD6 942 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 A0A0A6YYK5 440 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-216ENST00000476142 CCDC66A2RUB6 948 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 FZD9O00144 591 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 KRIT1O00522 736 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 ZNF862O60290 1169 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 PEX10O60683 326 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 PSAPP07602 524 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 TMEM253P0C7T8 217 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 DLATP10515 647 aaKnown RBP9.67□□□□□ -0.86
CCDC66-216ENST00000476142 ADSSP30520 456 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 PAK2Q13177 524 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 TRADDQ15628 312 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 C1orf220Q5T0J3 134 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 EMBQ6PCB8 327 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-216ENST00000476142 RPUSD2Q8IZ73 545 aaKnown RBP9.67□□□□□ -0.86
CCDC66-216ENST00000476142 OLIG1Q8TAK6 271 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 AFAP1L1Q8TED9 768 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 POMGNT1Q8WZA1 660 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 TEX13BQ9BXU2 312 aa9.67□□□□□ -0.86
CCDC66-216ENST00000476142 MYH11P35749 1972 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 HNRNPDLO14979 420 aaKnown RBP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 HSF2BPO75031 334 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 RGS20O76081 388 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 FAM153BP0C7A2 387 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 KCNA2P16389 499 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 RFX1P22670 979 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 CNGA1P29973 690 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 PRKCEQ02156 737 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 HLTFQ14527 1009 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 KIF22Q14807 665 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 R3HDM1Q15032 1099 aaKnown RBP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 FAM153CQ494X1 144 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 MTERF2Q49AM1 385 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 EPC2Q52LR7 807 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 NAA35Q5VZE5 725 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 XRRA1Q6P2D8 792 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 NT5DC3Q86UY8 548 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 C12orf56Q8IXR9 622 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 TSEN2Q8NCE0 465 aaKnown RBP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 REPS2Q8NFH8 660 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 CASKIN2Q8WXE0 1202 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 DDX47Q9H0S4 455 aaKnown RBP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 ACAD9Q9H845 621 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 ACP6Q9NPH0 428 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 A1CFQ9NQ94 594 aaKnown RBP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 CYP39A1Q9NYL5 469 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 SUCLA2Q9P2R7 463 aaPredicted RBP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 FAM153AQ9UHL3 310 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 ZC3H4Q9UPT8 1303 aaKnown RBP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 AGPSO00116 658 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 CLSTN1O94985 981 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 SGPL1O95470 568 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 ACTR2P61160 394 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 ADAT2Q7Z6V5 191 aaKnown RBP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 CCDC60Q8IWA6 550 aaPredicted RBP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 SLC17A8Q8NDX2 589 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 KIFAP3Q92845 792 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 FAM84AQ96KN4 292 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCDC66-216ENST00000476142 SYT11Q9BT88 431 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 ST6GALNAC4Q9H4F1 302 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 GDF3Q9NR23 364 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 CTTNBP2NLQ9P2B4 639 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 SLC9A2Q9UBY0 812 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 ZNF112Q9UJU3 913 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 USP20Q9Y2K6 914 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 FER1L6Q2WGJ9 1857 aa9.66□□□□□ -0.86
CCDC66-216ENST00000476142 C19orf81C9J6K1 198 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 CES2O00748 559 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 P4HA2O15460 535 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 CYP26A1O43174 497 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 FTLP02792 175 aaPredicted RBP9.65□□□□□ -0.86
CCDC66-216ENST00000476142 ITGA4P13612 1032 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 DLK2Q6UY11 383 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 SLFN11Q7Z7L1 901 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 MAP4K3Q8IVH8 894 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 RDM1Q8NG50 284 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 ACTRT1Q8TDG2 376 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 SEMA4DQ92854 862 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 POLR3FQ9H1D9 316 aaPredicted RBP9.65□□□□□ -0.86
CCDC66-216ENST00000476142 STXBP5LQ9Y2K9 1186 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 NCANO14594 1321 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms