RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 EHD4Q9H223 541 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 ALG2Q9H553 416 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 SLITRK6Q9H5Y7 841 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 MMRN2Q9H8L6 949 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 LUC7LQ9NQ29 371 aaKnown RBP7.48□□□□□ -1.21
UBR4-212ENST00000475973 EHD2Q9NZN4 543 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 PI4KBQ9UBF8 816 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 SRRDQ9UH36 339 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 AFG3L2Q9Y4W6 797 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 NCANO14594 1321 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 ADGRA2Q96PE1 1338 aa7.48□□□□□ -1.21
UBR4-212ENST00000475973 POTEMA6NI47 508 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 FAM196BA6NMK8 535 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 RAD51CO43502 376 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 HSF2BPO75031 334 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 RASSF9O75901 435 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 HEXIM1O94992 359 aaKnown RBP7.47□□□□□ -1.21
UBR4-212ENST00000475973 FAM107AO95990 144 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 ASNSP08243 561 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 GOLGA8HP0CJ92 632 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 SPATA31C1P0DKV0 1188 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 CYP2C8P10632 490 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 MDH1P40925 334 aaKnown RBP7.47□□□□□ -1.21
UBR4-212ENST00000475973 CCT5P48643 541 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 NAP1L1P55209 391 aaKnown RBP7.47□□□□□ -1.21
UBR4-212ENST00000475973 ERVK-9P63128 1117 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 GNGT1P63211 74 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 UBXN2AP68543 259 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 SLC7A5Q01650 507 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 BIRC3Q13489 604 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 MOGSQ13724 837 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 GIT2Q14161 759 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 GPATCH4Q5T3I0 446 aaKnown RBP7.47□□□□□ -1.21
UBR4-212ENST00000475973 BRICD5Q6PL45 260 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 BLOC1S3Q6QNY0 202 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 MAPKAPK5Q8IW41 473 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 SCUBE3Q8IX30 993 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 ZNF280CQ8ND82 737 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 TPCN2Q8NHX9 752 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 MAGEC3Q8TD91 643 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 BCAS4Q8TDM0 211 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 SNX29Q8TEQ0 813 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 TBC1D5Q92609 795 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 TLCD1Q96CP7 247 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 MS4A14Q96JA4 679 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 RNPC3Q96LT9 517 aaKnown RBP7.47□□□□□ -1.21
UBR4-212ENST00000475973 TRERF1Q96PN7 1200 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 USB1Q9BQ65 265 aaKnown RBP7.47□□□□□ -1.21
UBR4-212ENST00000475973 TMEM109Q9BVC6 243 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 STRA6Q9BX79 667 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 ARHGAP39Q9C0H5 1083 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 CPVLQ9H3G5 476 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 EPB41L5Q9HCM4 733 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 OLFML3Q9NRN5 406 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 PANK4Q9NVE7 773 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 DMAC2Q9NW81 257 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 SMARCAL1Q9NZC9 954 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 BIN2Q9UBW5 565 aaPredicted RBP7.47□□□□□ -1.21
UBR4-212ENST00000475973 SEC63Q9UGP8 760 aaKnown RBP7.47□□□□□ -1.21
UBR4-212ENST00000475973 NAGPAQ9UK23 515 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 DIS3Q9Y2L1 958 aaKnown RBP7.47□□□□□ -1.21
UBR4-212ENST00000475973 FRMPD4Q14CM0 1322 aa7.47□□□□□ -1.21
UBR4-212ENST00000475973 MYH10P35580 1976 aa7.46□□□□□ -1.21
UBR4-212ENST00000475973 ZSCAN5CA6NGD5 496 aaPredicted RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 GOLGA8CPA6NN73 597 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 MEIS2O14770 477 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 TNPO2O14787 897 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 ZBTB5O15062 677 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 PMM2O15305 246 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 DDX3YO15523 660 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 TRAPPC3O43617 180 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 PPFIA2O75334 1257 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 MYCP01106 439 aaPredicted RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 CYP3A4P08684 503 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 NUDT17P0C025 328 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 PLA2G4BP0C869 781 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 BCRP11274 1271 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 UCHL3P15374 230 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 MUTP22033 750 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 PON1P27169 355 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 RPA1P27694 616 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 GRK4P32298 578 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 SHMT1P34896 483 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 CAP2P40123 477 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 MRPL12P52815 198 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 SMTNP53814 917 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 TNNC1P63316 161 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 IRX3P78415 501 aaPredicted RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 CAP1Q01518 475 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 PRKCZQ05513 592 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 KCNH2Q12809 1159 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 AP3B2Q13367 1082 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 BYSLQ13895 437 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 MYBPC2Q14324 1141 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 IFI16Q16666 785 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 FAM110CQ1W6H9 321 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 CFAP58Q5T655 872 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 NAA35Q5VZE5 725 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 GPAT2Q6NUI2 795 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms