RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ZXDCQ2QGD7 858 aaPredicted RBP8.79□□□□□ -1
SMC5-203ENST00000475540 DBX2Q6ZNG2 339 aa8.79□□□□□ -1
SMC5-203ENST00000475540 TGFBRAP1Q8WUH2 860 aa8.79□□□□□ -1
SMC5-203ENST00000475540 ARL8AQ96BM9 186 aa8.79□□□□□ -1
SMC5-203ENST00000475540 PAWRQ96IZ0 340 aaKnown RBP8.79□□□□□ -1
SMC5-203ENST00000475540 KRTAP4-5Q9BYR2 181 aa8.79□□□□□ -1
SMC5-203ENST00000475540 SLC5A4Q9NY91 659 aa8.79□□□□□ -1
SMC5-203ENST00000475540 DPP7Q9UHL4 492 aa8.79□□□□□ -1
SMC5-203ENST00000475540 MYRFQ9Y2G1 1151 aa8.79□□□□□ -1
SMC5-203ENST00000475540 A0A1W2PR48 441 aa8.78□□□□□ -1
SMC5-203ENST00000475540 NRP1O14786 923 aa8.78□□□□□ -1
SMC5-203ENST00000475540 MTHFD2P13995 350 aa8.78□□□□□ -1
SMC5-203ENST00000475540 HIBADHP31937 336 aaKnown RBP8.78□□□□□ -1
SMC5-203ENST00000475540 MRPS9P82933 396 aaKnown RBP8.78□□□□□ -1
SMC5-203ENST00000475540 R3HDM1Q15032 1099 aaKnown RBP8.78□□□□□ -1
SMC5-203ENST00000475540 COG1Q8WTW3 980 aa8.78□□□□□ -1
SMC5-203ENST00000475540 LTA4HP09960 611 aaKnown RBP8.77□□□□□ -1.01
SMC5-203ENST00000475540 CDK17Q00537 523 aa8.77□□□□□ -1.01
SMC5-203ENST00000475540 UBE3CQ15386 1083 aa8.77□□□□□ -1.01
SMC5-203ENST00000475540 CDSNQ15517 529 aa8.77□□□□□ -1.01
SMC5-203ENST00000475540 ZNF808Q8N4W9 903 aaPredicted RBP8.77□□□□□ -1.01
SMC5-203ENST00000475540 AUTS2Q8WXX7 1259 aa8.77□□□□□ -1.01
SMC5-203ENST00000475540 QRSL1Q9H0R6 528 aaKnown RBP8.77□□□□□ -1.01
SMC5-203ENST00000475540 TLR9Q9NR96 1032 aa8.77□□□□□ -1.01
SMC5-203ENST00000475540 SH3BP1Q9Y3L3 701 aa8.77□□□□□ -1.01
SMC5-203ENST00000475540 WASHC2AQ641Q2 1341 aa8.77□□□□□ -1.01
SMC5-203ENST00000475540 CAPN14A8MX76 684 aa8.76□□□□□ -1.01
SMC5-203ENST00000475540 KRTAP10-2P60368 255 aa8.76□□□□□ -1.01
SMC5-203ENST00000475540 MEF2AQ02078 507 aaPredicted RBP8.76□□□□□ -1.01
SMC5-203ENST00000475540 FKBP15Q5T1M5 1219 aa8.76□□□□□ -1.01
SMC5-203ENST00000475540 NECAB2Q7Z6G3 386 aa8.76□□□□□ -1.01
SMC5-203ENST00000475540 THEMISQ8N1K5 641 aaPredicted RBP8.76□□□□□ -1.01
SMC5-203ENST00000475540 ANKRD35Q8N283 1001 aa8.76□□□□□ -1.01
SMC5-203ENST00000475540 OR5M3Q8NGP4 307 aa8.76□□□□□ -1.01
SMC5-203ENST00000475540 SH3RF3Q8TEJ3 882 aaPredicted RBP8.76□□□□□ -1.01
SMC5-203ENST00000475540 ORAI2Q96SN7 254 aa8.76□□□□□ -1.01
SMC5-203ENST00000475540 PUS7LQ9H0K6 701 aaKnown RBP8.76□□□□□ -1.01
SMC5-203ENST00000475540 CYP27B1O15528 508 aa8.75□□□□□ -1.01
SMC5-203ENST00000475540 PRAMEF4O60810 478 aa8.75□□□□□ -1.01
SMC5-203ENST00000475540 CANXP27824 592 aaKnown RBP8.75□□□□□ -1.01
SMC5-203ENST00000475540 WNT3AP56704 352 aa8.75□□□□□ -1.01
SMC5-203ENST00000475540 DUSP2Q05923 314 aa8.75□□□□□ -1.01
SMC5-203ENST00000475540 MFSD5Q6N075 450 aa8.75□□□□□ -1.01
SMC5-203ENST00000475540 GSPT2Q8IYD1 628 aaKnown RBP8.75□□□□□ -1.01
SMC5-203ENST00000475540 MFAP3LO75121 409 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 GPR3P46089 330 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 AMPD3Q01432 767 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 PUM1Q14671 1186 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMC5-203ENST00000475540 ELAVL1Q15717 326 aaKnown RBP8.74□□□□□ -1.01
SMC5-203ENST00000475540 C19orf54Q5BKX5 351 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 TOR2AQ5JU69 321 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 SPDYAQ5MJ70 313 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 MSL3Q8N5Y2 521 aaKnown RBP8.74□□□□□ -1.01
SMC5-203ENST00000475540 CNTD1Q8N815 330 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 FATE1Q969F0 183 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 MIEF2Q96C03 454 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 ZNF512Q96ME7 567 aaPredicted RBP8.74□□□□□ -1.01
SMC5-203ENST00000475540 EPC1Q9H2F5 836 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 DNAJC28Q9NX36 388 aa8.74□□□□□ -1.01
SMC5-203ENST00000475540 K7ESF4 209 aa8.73□□□□□ -1.01
SMC5-203ENST00000475540 CDK11BP21127 795 aaKnown RBP8.73□□□□□ -1.01
SMC5-203ENST00000475540 CASRP41180 1078 aa8.73□□□□□ -1.01
SMC5-203ENST00000475540 ERVK-21P61565 698 aa8.73□□□□□ -1.01
SMC5-203ENST00000475540 MUM1Q2TAK8 710 aa8.73□□□□□ -1.01
SMC5-203ENST00000475540 FAM180AQ6UWF9 173 aa8.73□□□□□ -1.01
SMC5-203ENST00000475540 SNX33Q8WV41 574 aa8.73□□□□□ -1.01
SMC5-203ENST00000475540 MENTQ9BUN1 341 aa8.73□□□□□ -1.01
SMC5-203ENST00000475540 IFT122Q9HBG6 1241 aa8.73□□□□□ -1.01
SMC5-203ENST00000475540 GIT1Q9Y2X7 761 aa8.73□□□□□ -1.01
SMC5-203ENST00000475540 GYPEP15421 78 aa8.72□□□□□ -1.01
SMC5-203ENST00000475540 CTSSP25774 331 aa8.72□□□□□ -1.01
SMC5-203ENST00000475540 KLF1Q13351 362 aaPredicted RBP8.72□□□□□ -1.01
SMC5-203ENST00000475540 SPTY2D1Q68D10 685 aaPredicted RBP8.72□□□□□ -1.01
SMC5-203ENST00000475540 ABHD15Q6UXT9 468 aa8.72□□□□□ -1.01
SMC5-203ENST00000475540 KCNK18Q7Z418 384 aa8.72□□□□□ -1.01
SMC5-203ENST00000475540 SPRED1Q7Z699 444 aa8.72□□□□□ -1.01
SMC5-203ENST00000475540 GGNQ86UU5 652 aa8.72□□□□□ -1.01
SMC5-203ENST00000475540 ZCRB1Q8TBF4 217 aaKnown RBP8.72□□□□□ -1.01
SMC5-203ENST00000475540 HECAQ9UBI9 543 aaPredicted RBP8.72□□□□□ -1.01
SMC5-203ENST00000475540 RPTORQ8N122 1335 aa8.72□□□□□ -1.01
SMC5-203ENST00000475540 HOXA3O43365 443 aaPredicted RBP8.71□□□□□ -1.02
SMC5-203ENST00000475540 PHF2O75151 1096 aa8.71□□□□□ -1.02
SMC5-203ENST00000475540 GUCY2FP51841 1108 aa8.71□□□□□ -1.02
SMC5-203ENST00000475540 CCT2P78371 535 aaKnown RBP8.71□□□□□ -1.02
SMC5-203ENST00000475540 SRSF2Q01130 221 aaKnown RBP8.71□□□□□ -1.02
SMC5-203ENST00000475540 NRN1LQ496H8 165 aa8.71□□□□□ -1.02
SMC5-203ENST00000475540 USP39Q53GS9 565 aaKnown RBP8.71□□□□□ -1.02
SMC5-203ENST00000475540 BTNL9Q6UXG8 535 aa8.71□□□□□ -1.02
SMC5-203ENST00000475540 AMOTL1Q8IY63 956 aa8.71□□□□□ -1.02
SMC5-203ENST00000475540 GLB1L3Q8NCI6 653 aaPredicted RBP8.71□□□□□ -1.02
SMC5-203ENST00000475540 ACE2Q9BYF1 805 aaPredicted RBP8.71□□□□□ -1.02
SMC5-203ENST00000475540 ENKD1Q9H0I2 346 aa8.71□□□□□ -1.02
SMC5-203ENST00000475540 AURKAIP1Q9NWT8 199 aaPredicted RBP8.71□□□□□ -1.02
SMC5-203ENST00000475540 ZBTB21Q9ULJ3 1066 aa8.71□□□□□ -1.02
SMC5-203ENST00000475540 TMEM127O75204 238 aa8.7□□□□□ -1.02
SMC5-203ENST00000475540 IPO13O94829 963 aaKnown RBP8.7□□□□□ -1.02
SMC5-203ENST00000475540 GNAT2P19087 354 aa8.7□□□□□ -1.02
SMC5-203ENST00000475540 ACRV1P26436 265 aa8.7□□□□□ -1.02
SMC5-203ENST00000475540 GZMKP49863 264 aa8.7□□□□□ -1.02
SMC5-203ENST00000475540 SLC5A3P53794 718 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms