RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 FAM178BQ8IXR5 827 aa12.72□□□□□ -0.37
GPM6B-208ENST00000475307 CNNM3Q8NE01 707 aa12.72□□□□□ -0.37
GPM6B-208ENST00000475307 CCDC51Q96ER9 411 aa12.72□□□□□ -0.37
GPM6B-208ENST00000475307 TMEM169Q96HH4 297 aa12.72□□□□□ -0.37
GPM6B-208ENST00000475307 CPB2Q96IY4 423 aa12.72□□□□□ -0.37
GPM6B-208ENST00000475307 GBP3Q9H0R5 595 aa12.72□□□□□ -0.37
GPM6B-208ENST00000475307 RSAD1Q9HA92 442 aa12.72□□□□□ -0.37
GPM6B-208ENST00000475307 NGRNQ9NPE2 291 aaKnown RBP12.72□□□□□ -0.37
GPM6B-208ENST00000475307 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.72□□□□□ -0.37
GPM6B-208ENST00000475307 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
GPM6B-208ENST00000475307 CNTNAP2Q9UHC6 1331 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 CARNS1A5YM72 827 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 LAD1O00515 517 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 MBTPS2O43462 519 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 ITGA4P13612 1032 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 CYP11B2P19099 503 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.37
GPM6B-208ENST00000475307 MUTP22033 750 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 SMAD4Q13485 552 aaKnown RBP12.71□□□□□ -0.37
GPM6B-208ENST00000475307 PDIA5Q14554 519 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 BMS1Q14692 1282 aaKnown RBP12.71□□□□□ -0.37
GPM6B-208ENST00000475307 DUSP6Q16828 381 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 RILPL1Q5EBL4 403 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 DTHD1Q6ZMT9 781 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 ZBTB8OSQ8IWT0 167 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 GJD3Q8N144 294 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 SNX29Q8TEQ0 813 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 FAM193BQ96PV7 902 aaPredicted RBP12.71□□□□□ -0.37
GPM6B-208ENST00000475307 CDCA3Q99618 268 aaPredicted RBP12.71□□□□□ -0.37
GPM6B-208ENST00000475307 EIF2AQ9BY44 585 aaKnown RBP12.71□□□□□ -0.37
GPM6B-208ENST00000475307 NFKBIZQ9BYH8 718 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 TRIM6Q9C030 488 aaPredicted RBP12.71□□□□□ -0.37
GPM6B-208ENST00000475307 CSRNP2Q9H175 543 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 NRDE2Q9H7Z3 1164 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 CD320Q9NPF0 282 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 UBN1Q9NPG3 1134 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.71□□□□□ -0.37
GPM6B-208ENST00000475307 KANSL3Q9P2N6 904 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.37
GPM6B-208ENST00000475307 KIAA1024Q9UPX6 916 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 IPPQ9Y573 584 aa12.71□□□□□ -0.37
GPM6B-208ENST00000475307 TCF20Q9UGU0 1960 aaKnown RBP12.7□□□□□ -0.38
GPM6B-208ENST00000475307 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 FSD2A1L4K1 749 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 HIDE1A8MVS5 230 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 B4GALT5O43286 388 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 POMCP01189 267 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 GALTP07902 379 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 SRGAP2BP0DMP2 458 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 ARF4P18085 180 aaPredicted RBP12.7□□□□□ -0.38
GPM6B-208ENST00000475307 SMC1AQ14683 1233 aaKnown RBP12.7□□□□□ -0.38
GPM6B-208ENST00000475307 ECM1Q16610 540 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 KRT79Q5XKE5 535 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 ZNF280BQ86YH2 543 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 HACE1Q8IYU2 909 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 IGSF22Q8N9C0 903 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 SMG8Q8ND04 991 aaKnown RBP12.7□□□□□ -0.38
GPM6B-208ENST00000475307 APOL6Q9BWW8 343 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 C2orf40Q9H1Z8 148 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 BHMT2Q9H2M3 363 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 DDX19AQ9NUU7 478 aaKnown RBP12.7□□□□□ -0.38
GPM6B-208ENST00000475307 CLEC1BQ9P126 229 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 DNAJB4Q9UDY4 337 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 PRKAG3Q9UGI9 489 aa12.7□□□□□ -0.38
GPM6B-208ENST00000475307 ARID2Q68CP9 1835 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 PP2D1A8MPX8 630 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 NPTXRO95502 500 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 CXCL14O95715 111 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 GLP2RO95838 553 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 ALDH2P05091 517 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 LIG1P18858 919 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 PRPHP41219 470 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 SLC11A1P49279 550 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 RBM10P98175 930 aaKnown RBP12.69□□□□□ -0.38
GPM6B-208ENST00000475307 SMAD2Q15796 467 aaKnown RBP12.69□□□□□ -0.38
GPM6B-208ENST00000475307 AMHR2Q16671 573 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 TMEM132AQ24JP5 1023 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 LARP1BQ659C4 914 aaKnown RBP12.69□□□□□ -0.38
GPM6B-208ENST00000475307 TMEM173Q86WV6 379 aaPredicted RBP12.69□□□□□ -0.38
GPM6B-208ENST00000475307 CDR2LQ86X02 465 aaPredicted RBP12.69□□□□□ -0.38
GPM6B-208ENST00000475307 VPS52Q8N1B4 723 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 MRPL43Q8N983 215 aaKnown RBP12.69□□□□□ -0.38
GPM6B-208ENST00000475307 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 DEPTORQ8TB45 409 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 IGSF21Q96ID5 467 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 MSLNLQ96KJ4 702 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 EPHX3Q9H6B9 360 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 PRMT7Q9NVM4 692 aaPredicted RBP12.69□□□□□ -0.38
GPM6B-208ENST00000475307 HES2Q9Y543 173 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 TRANK1O15050 2925 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 PLXNA4Q9HCM2 1894 aa12.69□□□□□ -0.38
GPM6B-208ENST00000475307 DDHD2O94830 711 aa12.68□□□□□ -0.38
GPM6B-208ENST00000475307 MLH1P40692 756 aa12.68□□□□□ -0.38
GPM6B-208ENST00000475307 AFF1P51825 1210 aaKnown RBP12.68□□□□□ -0.38
GPM6B-208ENST00000475307 ZP2Q05996 745 aa12.68□□□□□ -0.38
GPM6B-208ENST00000475307 COASYQ13057 564 aa12.68□□□□□ -0.38
GPM6B-208ENST00000475307 PPP2R5AQ15172 486 aa12.68□□□□□ -0.38
GPM6B-208ENST00000475307 ZRSR1Q15695 479 aaKnown RBP12.68□□□□□ -0.38
GPM6B-208ENST00000475307 IL17AQ16552 155 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms